RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PCDH8O95206 1070 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 SIX6O95475 246 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 MAKP20794 623 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 FAM74A3Q4VXF1 159 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ELFN2Q5R3F8 820 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 FAAP20Q6NZ36 180 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 THSD4Q6ZMP0 1018 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 NAXDQ8IW45 347 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ARL14Q8N4G2 192 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 EIF4E3Q8N5X7 224 aaKnown RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 OR2A1Q8NGT9 310 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 OR51A7Q8NH64 312 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 KLF2Q9Y5W3 355 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 EYSQ5T1H1 3165 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 CDHR4A6H8M9 788 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 PTP4A3O75365 173 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ECDO95905 644 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ATP1B1P05026 303 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 CDK3Q00526 305 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 DMKNQ6E0U4 476 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 GSG1LQ6UXU4 331 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 SSX6Q7RTT6 188 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 KCT2Q8NC54 265 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 OR13C2Q8NGS9 318 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 OR8D1Q8WZ84 308 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 ZCCHC4Q9H5U6 513 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 SCPEP1Q9HB40 452 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 TAS2R5Q9NYW4 299 aa22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 PCDHGA9Q9Y5G4 932 aaKnown RBP22.16■■□□□ 1.14
CSNK1E-203ENST00000396832 CXorf51AA0A1B0GTR3 108 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 KHDRBS3O75525 346 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 NAT2P11245 290 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 CSNK2A2P19784 350 aaPredicted RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 MELKQ14680 651 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 CNKSR3Q6P9H4 555 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 THEM6Q8WUY1 208 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 LRIG1Q96JA1 1093 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 AKAP7Q9P0M2 348 aaPredicted RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 ZMAT5Q9UDW3 170 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 PCDHGA5Q9Y5G8 931 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 NAP1L6A6NFF2 107 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 VEGFDO43915 354 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 CEBPBP17676 345 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 DEFA5Q01523 94 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 UBE2NLQ5JXB2 153 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF626Q68DY1 528 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 OR7G2Q8NG99 324 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 OR56A1Q8NGH5 318 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 ZDHHC1Q8WTX9 485 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 TEAD3Q99594 435 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 MRPS30Q9NP92 439 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 MBNL1Q9NR56 388 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 SPHK1Q9NYA1 384 aa22.15■■□□□ 1.14
CSNK1E-203ENST00000396832 CISD3P0C7P0 127 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 ERGP11308 486 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 MAT2AP31153 395 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 OC90Q02509 493 aaPredicted RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 PRDX1Q06830 199 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 PUS10Q3MIT2 529 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 LINC00303Q3SY05 128 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 METRNLQ641Q3 311 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 ZNF836Q6ZNA1 936 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 LRRC46Q96FV0 321 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 OR1F2PQ96R84 312 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 USB1Q9BQ65 265 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 PLEKHA1Q9HB21 404 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 GPN1Q9HCN4 374 aaPredicted RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 SLC6A20Q9NP91 592 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 PRDM7Q9NQW5 492 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 INPP5EQ9NRR6 644 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 MED11Q9P086 117 aa22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 USP36Q9P275 1121 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-203ENST00000396832 CHD9Q3L8U1 2897 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 ALPK2Q86TB3 2170 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 FXYD6-FXYD2A0A087WZ82 144 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 ABCD4O14678 606 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 EMC8O43402 210 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 TEAD1P28347 426 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 P2RY2P41231 377 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 ANXA11P50995 505 aaKnown RBP22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 AP3S2P59780 193 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 BTN3A2P78410 334 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 ZNF85Q03923 595 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 FRRS1Q6ZNA5 592 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 UBE2Q1Q7Z7E8 422 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 OR5M9Q8NGP3 310 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 PEX11GQ96HA9 241 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 DERL3Q96Q80 235 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 C1QTNF2Q9BXJ5 285 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 FXYD6Q9H0Q3 95 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 IFT22Q9H7X7 185 aa22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 EXOSC3Q9NQT5 275 aaKnown RBP22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 ZNF443Q9Y2A4 671 aaPredicted RBP22.14■■□□□ 1.13
CSNK1E-203ENST00000396832 CSF2RAP15509 400 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 ABHD17CQ6PCB6 329 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 SERPINA12Q8IW75 414 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 OR52B4Q8NGK2 314 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 GRHL3Q8TE85 626 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 FBXO34Q9NWN3 711 aa22.13■■□□□ 1.13
CSNK1E-203ENST00000396832 WDR45Q9Y484 360 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms