RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CCL7P80098 99 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 FABP5Q01469 135 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 GALEQ14376 348 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LCN1P1Q5VSP4 162 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 CBLN3Q6UW01 205 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 DPY19L2P2Q6ZN68 376 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 CCDC190Q86UF4 302 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 PARP16Q8N5Y8 322 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 OR52E2Q8NGJ4 325 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 PIGKQ92643 395 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 NAT6Q93015 286 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 OMA1Q96E52 524 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 TBX5Q99593 518 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LRRN3Q9H3W5 708 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 RERGLQ9H628 205 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ADGRL4Q9HBW9 690 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 SLC22A11Q9NSA0 550 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 HAO2Q9NYQ3 351 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 A0A1W2PQD3 144 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ISPDA4D126 451 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 CDC14CA4D256 554 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LRRTM2O43300 516 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 LAMTOR5O43504 91 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 MRPL3P09001 348 aaKnown RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 SBK2P0C263 348 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 CLUP10909 449 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 HIST1H1CP16403 213 aaKnown RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 CELP19835 753 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 GRK6P43250 576 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 PSMD7P51665 324 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ZNF117Q03924 483 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 MXD1Q05195 221 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
CBX3-202ENST00000396386 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ZNF441Q8N8Z8 693 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 FAM181AQ8N9Y4 354 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ZNF563Q8TA94 476 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 STT3BQ8TCJ2 826 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 PPP1R14BQ96C90 147 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 RNF31Q96EP0 1072 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 OR6C1Q96RD1 312 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 TMED9Q9BVK6 235 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 C12orf10Q9HB07 376 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 TRIM36Q9NQ86 728 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ABCB10Q9NRK6 738 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 ASB6Q9NWX5 421 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
CBX3-202ENST00000396386 EXPH5Q8NEV8 1989 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 IGLV3-12A0A075B6K2 115 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 A0A1W2PQM1 296 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 LOC110117498-PIK3R3F6TDL0 507 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 CTDSP2O14595 271 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 TBX1O43435 398 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 CFIP05156 583 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 PRPS1P60891 318 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 PSPHP78330 225 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
CBX3-202ENST00000396386 FAAH2Q6GMR7 532 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 PLEKHG7Q6ZR37 379 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 SHISA6Q6ZSJ9 500 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 C17orf47Q8NEP4 570 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 EDAQ92838 391 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 GPX7Q96SL4 187 aaPredicted RBP13.66□□□□□ -0.22
CBX3-202ENST00000396386 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 ISG20L2Q9H9L3 353 aaKnown RBP13.66□□□□□ -0.22
CBX3-202ENST00000396386 RHBDL2Q9NX52 303 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 RARRES3Q9UL19 164 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 PI4KAP42356 2102 aa13.66□□□□□ -0.22
CBX3-202ENST00000396386 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ARPC3O15145 178 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 RGS5O15539 181 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 SCRG1O75711 98 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 MT-ND5P03915 603 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GYPBP06028 91 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 MST1P26927 711 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 PNLIPRP2P54317 469 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ZXDAP98168 799 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GPR50Q13585 617 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ZNF74Q16587 644 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ISXQ2M1V0 245 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 C10orf53Q8N6V4 93 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ARIH2OSQ8N7S6 290 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 SMPDL3BQ92485 455 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 TPK1Q9H3S4 243 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GAREM1Q9H706 876 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 QPCTLQ9NXS2 382 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms