RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NPSR1Q6W5P4 371 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 PARP16Q8N5Y8 322 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 FLVCR1-AS1Q8TAF5 88 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 YIPF6Q96EC8 236 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 ASB6Q9NWX5 421 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TXNL4BQ9NX01 149 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 THADAQ6YHU6 1953 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 IQCMA0A1B0GVH7 501 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 ZNF701M0R085 212 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 AK1P00568 194 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 HOXC4P09017 264 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 PRKCAP17252 672 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 FPR3P25089 353 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 SSX1Q16384 188 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 ZNF770Q6IQ21 691 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TSEN15Q8WW01 171 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 SYT4Q9H2B2 425 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TMEM5Q9Y2B1 443 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 CHST2Q9Y4C5 530 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TMEM72A0PK05 275 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TBX19O60806 448 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 ADAM11O75078 769 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TUBA1BP68363 451 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 SLC6A19Q695T7 634 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TUBA1AQ71U36 451 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 DYNC2LI1Q8TCX1 351 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 OMA1Q96E52 524 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 LCORQ96JN0 433 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 NDEL1Q9GZM8 345 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 MEPEQ9NQ76 525 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 CNOT2Q9NZN8 540 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 KCND3Q9UK17 655 aa14.6□□□□□ -0.07
SMARCD1-202ENST00000394963 TSC22D2O75157 780 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 MT-ND5P03915 603 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 OR8G3PP0DMU2 310 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 SHC1P29353 583 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 GPR143P51810 404 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 HSD17B7P56937 341 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ALKBH2Q6NS38 261 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 EMC6Q9BV81 110 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 VN1R1Q9GZP7 353 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 WNT16Q9UBV4 365 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 EXOSC1Q9Y3B2 195 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 HEATR5AQ86XA9 2040 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ACOD1A6NK06 481 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 DVL2O14641 736 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 AHSA1O95433 338 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 THY1P04216 161 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 PSKH1P11801 424 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 FASLGP48023 281 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 CD300CQ08708 224 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 OR7A5Q15622 319 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 DCDC5Q6ZRR9 648 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 LSM14AQ8ND56 463 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ULBP3Q9BZM4 244 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 MCUBQ9NWR8 336 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 AKAP7Q9P0M2 348 aaPredicted RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 EPHA6Q9UF33 1036 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 TESQ9UGI8 421 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 A0A1B0GX78 115 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 HPGDSO60760 199 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 TRAPPC6AO75865 159 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ZNF136P52737 540 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 RAB40BQ12829 278 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 UBE2UQ5VVX9 321 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 MEPCEQ7L2J0 689 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ZNF566Q969W8 418 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 TRMT61AQ96FX7 289 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 TEAD3Q99594 435 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 ALKBH4Q9NXW9 302 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 POU2F3Q9UKI9 436 aa14.59□□□□□ -0.07
SMARCD1-202ENST00000394963 A0A0B4J203 849 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 FAM240BA0A1B0GVZ2 78 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 FMO6PO60774 539 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 CT45A8P0DMV1 189 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 CT45A9P0DMV2 189 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 CSF2RBP32927 897 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 BLVRAP53004 296 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 CBX3Q13185 183 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 CT45A2Q5DJT8 189 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 PWWP2BQ6NUJ5 590 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 OR5W2Q8NH69 310 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 TM9SF4Q92544 642 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 ARHGDIGQ99819 225 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 C14orf105Q9NVL8 296 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 LAMP5Q9UJQ1 280 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 SLC22A31A6NKX4 558 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 LALBAP00709 142 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 TGFBR2P37173 567 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 GBX2P52951 348 aaPredicted RBP14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 LRFN4Q6PJG9 635 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 DPY19L4Q7Z388 723 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 RDH10Q8IZV5 341 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 FAM26EQ8N5C1 309 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 NANOGP1Q8N7R0 232 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 MMP28Q9H239 520 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 PRDM9Q9NQV7 894 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 PCDHGB6Q9Y5F9 930 aa14.58□□□□□ -0.08
SMARCD1-202ENST00000394963 APC2O95996 2303 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms