RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 VWC2LB2RUY7 222 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 DNPH1O43598 174 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 NR4A2P43354 598 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 CARTPTQ16568 116 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 ADGRG3Q86Y34 549 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 FAM71CQ8NEG0 241 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 EPS8L3Q8TE67 593 aaKnown RBP18.48■□□□□ 0.55
TRAF4-203ENST00000394925 PIMREGQ9BSJ6 248 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 MECRQ9BV79 373 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 PRR14Q9BWN1 585 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 OR51I1Q9H343 314 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 SLC7A10Q9NS82 523 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 DCTN4Q9UJW0 460 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 MOKQ9UQ07 419 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 SLC35A3Q9Y2D2 325 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 FKBP7Q9Y680 259 aa18.48■□□□□ 0.55
TRAF4-203ENST00000394925 SKAP2O75563 359 aaPredicted RBP18.47■□□□□ 0.55
TRAF4-203ENST00000394925 APEHP13798 732 aaKnown RBP18.47■□□□□ 0.55
TRAF4-203ENST00000394925 CLK1P49759 484 aaKnown RBP18.47■□□□□ 0.55
TRAF4-203ENST00000394925 SWI5Q1ZZU3 235 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 MST1LQ2TV78 715 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 TSPO2Q5TGU0 170 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 HMGN2P46Q86SG4 172 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 C17orf78Q8N4C9 275 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 C1orf162Q8NEQ5 155 aaPredicted RBP18.47■□□□□ 0.55
TRAF4-203ENST00000394925 UBLCP1Q8WVY7 318 aaPredicted RBP18.47■□□□□ 0.55
TRAF4-203ENST00000394925 XAGE5Q8WWM1 108 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 SORCS2Q96PQ0 1159 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 PARPBPQ9NWS1 579 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 TMEM181Q9P2C4 612 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 WDR45Q9Y484 360 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 FLVCR1Q9Y5Y0 555 aa18.47■□□□□ 0.55
TRAF4-203ENST00000394925 NDUFS8O00217 210 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 KIAA0513O60268 411 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 OR12D1P0DN82 309 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 G6PDP11413 515 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 HNF1AP20823 631 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 FKBP2P26885 142 aaKnown RBP18.46■□□□□ 0.55
TRAF4-203ENST00000394925 PRPS1P60891 318 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 H3F3AP84243 136 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 TGFBR3Q03167 851 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 OR4F3Q6IEY1 312 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 TYW3Q6IPR3 259 aaKnown RBP18.46■□□□□ 0.55
TRAF4-203ENST00000394925 EMBQ6PCB8 327 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 ZCCHC23Q6ZST2 131 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 TUBGCP3Q96CW5 907 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 ZG16BQ96DA0 208 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 FOXN4Q96NZ1 517 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 TRAPPC4Q9Y296 219 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 SLC9A8Q9Y2E8 581 aa18.46■□□□□ 0.55
TRAF4-203ENST00000394925 IGHV4-61A0A0C4DH41 118 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 CDH2P19022 906 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-203ENST00000394925 IDH2P48735 452 aaKnown RBP18.45■□□□□ 0.54
TRAF4-203ENST00000394925 ATAD3BQ5T9A4 648 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 TNFAIP8L2Q6P589 184 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-203ENST00000394925 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 ARFGAP2Q8N6H7 521 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 OR4A15Q8NGL6 344 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 RAB8BQ92930 207 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 VRK1Q99986 396 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-203ENST00000394925 NAA11Q9BSU3 229 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-203ENST00000394925 PPCSQ9HAB8 311 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 ZDHHC2Q9UIJ5 367 aa18.45■□□□□ 0.54
TRAF4-203ENST00000394925 TMED7-TICAM2A0A0A6YYA0 188 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 CLDN24A6NM45 220 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 KLF11O14901 512 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 WNT11O96014 354 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 TGFAP01135 160 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 IMPDH2P12268 514 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 MPGP29372 298 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 ARRB2P32121 409 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 CLDN8P56748 225 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 SNRPD2P62316 118 aaKnown RBP18.44■□□□□ 0.54
TRAF4-203ENST00000394925 SLC35A1P78382 337 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 IQCCQ4KMZ1 466 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 FRRS1Q6ZNA5 592 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 ANKS4BQ8N8V4 417 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 MIPOL1Q8TD10 442 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 ROPN1LQ96C74 230 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 APOPT1Q96IL0 206 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 PCDHGB4Q9UN71 923 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 TMED7Q9Y3B3 224 aa18.44■□□□□ 0.54
TRAF4-203ENST00000394925 LOC390937A0A1W2PQ73 354 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 TMEM72A0PK05 275 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 EIF1BO60739 113 aaKnown RBP18.43■□□□□ 0.54
TRAF4-203ENST00000394925 AGR2O95994 175 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 KCNJ10P78508 379 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 PLAURQ03405 335 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 FUT5Q11128 374 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 SQLEQ14534 574 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 SLC17A1Q14916 467 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 HIKESHIQ53FT3 197 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 LIPNQ5VXI9 398 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 SLC46A3Q7Z3Q1 461 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 OIT3Q8WWZ8 545 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 DDIT4LQ96D03 193 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 SAP130Q9H0E3 1048 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 EXOSC3Q9NQT5 275 aaKnown RBP18.43■□□□□ 0.54
TRAF4-203ENST00000394925 POLE3Q9NRF9 147 aa18.43■□□□□ 0.54
TRAF4-203ENST00000394925 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms