RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ARID1BQ8NFD5 2236 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 CDC40O60508 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 SLC22A5O76082 557 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 KDM4BO94953 1096 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 RAB40ALP0C0E4 278 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 DEFB110Q30KQ9 67 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 CCDC157Q569K6 752 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 YIF1BQ5BJH7 314 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 SLC6A19Q695T7 634 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 SLC43A2Q8N370 569 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 HAVCR2Q8TDQ0 301 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 RAB40AQ8WXH6 277 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 UPRTQ96BW1 309 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 PEX11GQ96HA9 241 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 COX14Q96I36 57 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 SDHCQ99643 169 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 TEX101Q9BY14 249 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 FBRSQ9HAH7 460 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 FGF22Q9HCT0 170 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 EXOGQ9Y2C4 368 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 ZNF281Q9Y2X9 895 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 EGFP01133 1207 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 UGT2B7P16662 529 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 DGCR2P98153 550 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 C19orf48Q6RUI8 117 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 KLHL24Q6TFL4 600 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 UBE3DQ7Z6J8 389 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 SLC35F3Q8IY50 421 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 JAGN1Q8N5M9 183 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 OR8S1Q8NH09 359 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 PHYHIPQ92561 330 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 CNOT9Q92600 299 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 MMABQ96EY8 250 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 ASB16Q96NS5 453 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 DCLRE1CQ96SD1 692 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 STACQ99469 402 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 POTEKPQ9BYX7 375 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 NOX3Q9HBY0 568 aa10.8□□□□□ -0.68
UBE2D3-209ENST00000394804 A0A0J9YY10 115 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 OR14I1A6ND48 311 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 SCO2O43819 266 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 GNALP38405 381 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 CD79BP40259 229 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 AGERQ15109 404 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ACOXLQ9NUZ1 547 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 CLDND1Q9NY35 253 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 GLTPQ9NZD2 209 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ZNF337Q9Y3M9 751 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 KANTRA0A1W2PQU2 76 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ATP1B1P05026 303 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 TFPIP10646 304 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 HNRNPA2B1P22626 353 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 NFATC4Q14934 902 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 GLT8D1Q68CQ7 371 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 TANGO2Q6ICL3 276 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 OR6V1Q8N148 313 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 RELTQ969Z4 430 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ZC3HAV1LQ96H79 300 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 OR8D2Q9GZM6 311 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 NOX4Q9NPH5 578 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 MAN2C1Q9NTJ4 1040 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 COPS7AQ9UBW8 275 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 CSN2P05814 226 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 EVI2BP34910 448 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 PCGF3Q3KNV8 242 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 SCGB2B2Q4G0G5 96 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ALG10Q5BKT4 473 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 ZNF362Q5T0B9 420 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 PRAMEF17Q5VTA0 474 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 C3P1Q6ZMU1 363 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 SPACA7Q96KW9 195 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 B3GNT4Q9C0J1 378 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 TMEM168Q9H0V1 697 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 TRPV4Q9HBA0 871 aa10.79□□□□□ -0.68
UBE2D3-209ENST00000394804 C11orf98E9PRG8 122 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 FRKP42685 505 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 SOX9P48436 509 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 RAP2BP61225 183 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 GARNL3Q5VVW2 1013 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 KCTD18Q6PI47 426 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 NUP54Q7Z3B4 507 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PRSS58Q8IYP2 241 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 PELOQ9BRX2 385 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 SYNPO2LQ9H987 977 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 COQ3Q9NZJ6 369 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 EMC3Q9P0I2 261 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 NOP16Q9Y3C1 178 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 FRMPD3Q5JV73 1810 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 ARPC5O15511 151 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 SPARCP09486 303 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 CCR9P51686 369 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 CLDN12P56749 244 aa10.78□□□□□ -0.68
UBE2D3-209ENST00000394804 E2F1Q01094 437 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms