RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 LRIT1Q9P2V4 623 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 A0A0B4J203 849 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TRAPPC13A5PLN9 417 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CHP2O43745 196 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PAPLNO95428 1278 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PRH1P02810 166 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 KLK3P07288 261 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 HOXD4P09016 255 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 UBBP0CG47 229 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 UBCP0CG48 685 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 PVRP15151 417 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FCARP24071 287 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 IL12BP29460 328 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 MESP2Q0VG99 397 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 MICAQ29983 383 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 AKR1C8PQ5T2L2 129 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 OR2G6Q5TZ20 316 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 C1orf189Q5VU69 101 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 MLIPQ5VWP3 458 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FRMPD2BQ6IN97 320 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FAM180BQ6P0A1 224 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FIP1L1Q6UN15 594 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 C5orf46Q6UWT4 87 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TMEM92Q6UXU6 159 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 Q6ZS52 159 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CEACAM19Q7Z692 300 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 LAS2Q8IYD9 372 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 METTL27Q8N6F8 245 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 RELL2Q8NC24 303 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 HMGCLL1Q8TB92 370 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PAQR8Q8TEZ7 354 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CA5BP1Q8WTZ4 195 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 HAVCR1Q96D42 359 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 COX14Q96I36 57 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PIP5K1AQ99755 562 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CMSS1Q9BQ75 279 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 OR51V1Q9H2C8 321 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 WNT16Q9UBV4 365 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 CLEC2DQ9UHP7 191 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 A0A1W2PPK0 400 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 NRG2O14511 850 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 FLRT2O43155 660 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SRPX2O60687 465 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 RPL4P36578 427 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 MRPL19P49406 292 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 RPS26P62854 115 aaKnown RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 ZNF91Q05481 1191 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 GBX1Q14549 363 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 RHEBQ15382 184 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 P2RY14Q15391 338 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SEC23BQ15437 767 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TMEM44Q2T9K0 475 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 DEFB110Q30KQ9 67 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 ZNF791Q3KP31 576 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 SMARCD3Q6STE5 483 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 ZNF546Q86UE3 836 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 FAM160A2Q8N612 972 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 TM9SF4Q92544 642 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 UCN3Q969E3 161 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 MAL2Q969L2 176 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 UPRTQ96BW1 309 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 DUSP23Q9BVJ7 150 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 GAREM1Q9H706 876 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 SLC6A20Q9NP91 592 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 PRODH2Q9UF12 536 aa5.29□□□□□ -1.56
RFFL-202ENST00000394597 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
RFFL-202ENST00000394597 ANXA2P2A6NMY6 339 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 H0YGG7 62 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 AGPAT2O15120 278 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CSO75390 466 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 ARL6IP5O75915 188 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 DCNP07585 359 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SNRNP70P08621 437 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 HOXC4P09017 264 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SMIM6P0DI80 62 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SAGP10523 405 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 MTNR1AP48039 350 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ARF3P61204 181 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 ADAM8P78325 824 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SHC2P98077 582 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 BEX5Q5H9J7 111 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ADAM5Q6NVV9 412 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TTLL10Q6ZVT0 673 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SLC29A4Q7RTT9 530 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 GPAT4Q86UL3 456 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 LURAP1LQ8IV03 231 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CDH26Q8IXH8 852 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 OR1J4Q8NGS1 313 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 WDR20Q8TBZ3 569 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TMEM163Q8TC26 289 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ELP4Q96EB1 424 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 C14orf79Q96F83 325 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 S100A16Q96FQ6 103 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 OPALINQ96PE5 141 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZFP57Q9NU63 452 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms