RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 FAM111BQ6SJ93 734 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 SDR9C7Q8NEX9 313 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 OR5J2Q8NH18 312 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 RIT1Q92963 219 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 PDCD1LG2Q9BQ51 273 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 C2orf42Q9NWW7 574 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 SCML1Q9UN30 329 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 MAB21L2Q9Y586 359 aa10.02□□□□□ -0.81
BRF1-204ENST00000392557 TRBV2A0A0J9YWF9 115 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 OR2W5A6NFC9 320 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SLC22A31A6NKX4 558 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SEC14L5O43304 696 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 CTSVO60911 334 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SOX30O94993 753 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 RCBTB2O95199 551 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PTHLHP12272 177 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 UGT2B7P16662 529 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 BTG1P62324 171 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ZMYND11Q15326 602 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 DECR1Q16698 335 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 NIPAL3Q6P499 406 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 VN1R4Q7Z5H5 301 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 OR52E2Q8NGJ4 325 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 COQ8AQ8NI60 647 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 THAP4Q8WY91 577 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 BPIFA2Q96DR5 249 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 OR14A2Q96R54 314 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 DDOQ99489 341 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TEAD3Q99594 435 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 GAL3ST1Q99999 423 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 C12orf4Q9NQ89 552 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MGAT4CQ9UBM8 478 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MED31Q9Y3C7 131 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SLCO1B1Q9Y6L6 691 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 CENPVL1A0A0U1RR11 272 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TRABD2BA6NFA1 517 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PEX12O00623 359 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 P2RX6O15547 441 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PROS1P07225 676 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 NPR2P20594 1047 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MAKP20794 623 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MAOBP27338 520 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 GDNFP39905 211 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 VEGFCP49767 419 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 BLVRAP53004 296 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MRPS21P82921 87 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 FOXK2Q01167 660 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ST3GAL2Q16842 350 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PLA1AQ53H76 456 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SLC48A1Q6P1K1 146 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 FIGLAQ6QHK4 219 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PRSS41Q7RTY9 318 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SPERTQ8NA61 448 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SRFBP1Q8NEF9 429 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ZNF559Q9BR84 538 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 GINS4Q9BRT9 223 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 CCDC86Q9H6F5 360 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 MTHFD2LQ9H903 347 aaPredicted RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 MRPS18AQ9NVS2 196 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 ACTR10Q9NZ32 417 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 CA14Q9ULX7 337 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 SMAD9O15198 467 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 LDB3O75112 727 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 THEGLP0DJG4 465 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 HK1P19367 917 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 NDUFS1P28331 727 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MAGEB1P43366 347 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 SOX2P48431 317 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 NNATQ16517 81 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MRPL2Q5T653 305 aaKnown RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 ZNF836Q6ZNA1 936 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 RNF44Q7L0R7 432 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 GPALPP1Q8IXQ4 340 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TDHQ8IZJ6 230 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ZNF687Q8N1G0 1237 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MFSD9Q8NBP5 474 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 OR7G2Q8NG99 324 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 RERGQ96A58 199 aaPredicted RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 ELMOD3Q96FG2 381 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 MS4A3Q96HJ5 214 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 OR2M2Q96R28 347 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 PITHD1Q9GZP4 211 aaPredicted RBP10.01□□□□□ -0.81
BRF1-204ENST00000392557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■■□ 19.6
BRF1-204ENST00000392557 FBRSQ9HAH7 460 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TMEM27Q9HBJ8 222 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TMEM138Q9NPI0 162 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ADAM29Q9UKF5 820 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 GTF2A1LQ9UNN4 478 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 ABCA7Q8IZY2 2146 aa10.01□□□□□ -0.81
BRF1-204ENST00000392557 TRAPPC13A5PLN9 417 aa10□□□□□ -0.81
BRF1-204ENST00000392557 ANKRD61A6NGH8 418 aa10□□□□□ -0.81
BRF1-204ENST00000392557 L7N2F9 121 aa10□□□□□ -0.81
BRF1-204ENST00000392557 SYT5O00445 386 aa10□□□□□ -0.81
BRF1-204ENST00000392557 GPR171O14626 319 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms