RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 RALGPS2Q86X27 583 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 CENPLQ8N0S6 344 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 C6orf223Q8N319 242 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 CLDN19Q8N6F1 224 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 OR10G3Q8NGC4 313 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 OR6C4Q8NGE1 309 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 SCRT1Q9BWW7 348 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 NECAP2Q9NVZ3 263 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 AATFQ9NY61 560 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 STOX2Q9P2F5 926 aaPredicted RBP3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 MFHAS1Q9Y4C4 1052 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 U3KQV3 271 aa3.41□□□□□ -1.86
SNORA40.4-201ENST00000390971 IGHV1OR21-1A0A087WYE8 117 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 A0A096LNJ9 63 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 CLDN3O15551 220 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 TNFSF13O75888 250 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 POLR2EP19388 210 aaKnown RBP3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 RFC4P35249 363 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 DLX1P56177 255 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 ZNF763Q0D2J5 394 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 MFSD6LQ8IWD5 586 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 ZNF561Q8N587 486 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 ATP6V0D2Q8N8Y2 350 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 NDRG1Q92597 394 aaKnown RBP3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 ZNF670Q9BS34 389 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 PLA2G2FQ9BZM2 168 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 FOLH1BQ9HBA9 442 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 SMPD3Q9NY59 655 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 ODF2LQ9ULJ1 636 aa3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 MTCL1Q9Y4B5 1905 aaKnown RBP3.4□□□□□ -1.87
SNORA40.4-201ENST00000390971 PDS5BQ9NTI5 1447 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 IGKV1D-8A0A087WSZ0 117 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 LRCOL1A6NCL2 159 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 E9PBE3 544 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 OR1F1O43749 312 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 UFL1O94874 794 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 MFN2O95140 757 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 LRATO95237 230 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 MOSP00540 346 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 LGALS2P05162 132 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 NT5EP21589 574 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 PTGDSP41222 190 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 BOLA3Q53S33 107 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 PIGGQ5H8A4 983 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 ZNF571Q7Z3V5 609 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 LRRC43Q8N309 656 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 KIR2DL5BQ8NHK3 375 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 SPRYD4Q8WW59 207 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 HTR3CQ8WXA8 447 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 TMEM158Q8WZ71 300 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 SEC22AQ96IW7 307 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 P2RY13Q9BPV8 354 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 ROGDIQ9GZN7 287 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 C20orf85Q9H1P6 137 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 SUDS3Q9H7L9 328 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 RBAKQ9NYW8 714 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 ACTR3BQ9P1U1 418 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 TBX21Q9UL17 535 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 TRAF3IP3Q9Y228 551 aa3.39□□□□□ -1.87
SNORA40.4-201ENST00000390971 KDRP35968 1356 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 A0A0G2JN53 185 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 A0A1B0GUS0 222 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 DCTN6O00399 190 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 CXCL13O43927 109 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 TRIM16O95361 564 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 POU2F1P14859 743 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 HOXA9P31269 272 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 SHMT2P34897 504 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 GLP1RP43220 463 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 CNTN2Q02246 1040 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 TIGD3Q6B0B8 471 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 LRRC31Q6UY01 552 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 RDH10Q8IZV5 341 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 STXBP6Q8NFX7 210 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 TMEM117Q9H0C3 514 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 RWDD1Q9H446 243 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 RASD1Q9Y272 281 aa3.38□□□□□ -1.87
SNORA40.4-201ENST00000390971 A0A1W2PQ67 120 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 HIP1O00291 1037 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 PLEKP08567 350 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 CXCR2P25025 360 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 CALCRP30988 508 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 TFPI2P48307 235 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 MADCAM1Q13477 382 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 CCDC57Q2TAC2 916 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 BLOC1S2Q6QNY1 142 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 PRSS41Q7RTY9 318 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 NPBQ8NG41 125 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 ARPC1AQ92747 370 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 SH3YL1Q96HL8 342 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 C7orf34Q96L11 122 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 HDHD3Q9BSH5 251 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 DPH5Q9H2P9 285 aa3.37□□□□□ -1.87
SNORA40.4-201ENST00000390971 SIGLEC8Q9NYZ4 499 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms