RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FBXO6Q9NRD1 293 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40-201ENST00000388090 EPS15L1Q9UBC2 864 aa-0.67□□□□□ -2.52
SNORA40-201ENST00000388090 GHRLQ9UBU3 117 aa-0.67□□□□□ -2.52
SNORA40-201ENST00000388090 XPO7Q9UIA9 1087 aaKnown RBP-0.67□□□□□ -2.52
SNORA40-201ENST00000388090 V9GY05 133 aa-0.67□□□□□ -2.52
SNORA40-201ENST00000388090 PP2D1A8MPX8 630 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 A8MUI8 341 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 H0YHG0 523 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 XPO1O14980 1071 aaKnown RBP-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 AGPAT2O15120 278 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 GMNNO75496 209 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 STARD3NLO95772 234 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 APRTP07741 180 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 OR56A5P0C7T3 313 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 C8orf89P0DMQ9 161 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 PRPS2P11908 318 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 BCKDHAP12694 445 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 FOLR1P15328 257 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 CBR1P16152 277 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 CNR1P21554 472 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 BDNFP23560 247 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 DCKP27707 260 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 CALCRP30988 508 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 FMO3P31513 532 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 BTCP35070 178 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 VDAC2P45880 294 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 BIDP55957 195 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 ACSF3Q4G176 576 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 TCP11X2Q5H9J9 407 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 NKAIN2Q5VXU1 208 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 ZFP1Q6P2D0 407 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 ZNF562Q6V9R5 426 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 C1orf186Q6ZWK4 172 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 CNDP2Q96KP4 475 aaKnown RBP-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 WFIKKN1Q96NZ8 548 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 PANX3Q96QZ0 392 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 CAMK2N2Q96S95 79 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 MLPHQ9BV36 600 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 NAPBQ9H115 298 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 SLCO1B3Q9NPD5 702 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 SLC25A15Q9Y619 301 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 NFASCO94856 1347 aa-0.68□□□□□ -2.52
SNORA40-201ENST00000388090 NPC1L1Q9UHC9 1359 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 IGKV1D-8A0A087WSZ0 117 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 SLC31A2O15432 143 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 BGLAPP02818 100 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 SFTPBP07988 381 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 ATP6V1B2P21281 511 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CXCR2P25025 360 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CXCL12P48061 93 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 FUT5Q11128 374 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 ASPHQ12797 758 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 STXBP2Q15833 593 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 SGCAQ16586 387 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 SLC39A4Q6P5W5 647 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 PAQR9Q6ZVX9 377 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CYS1Q717R9 158 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 NET1Q7Z628 596 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 AMZ2Q86W34 360 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 GRAMD2AQ8IUY3 354 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 SIAH3Q8IW03 269 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 LY6G5BQ8NDX9 201 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CIRBP-AS1Q8TBR5 109 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 BLNKQ8WV28 456 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 N4BP2L2Q92802 583 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 DUS3LQ96G46 650 aaKnown RBP-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 ZBED3Q96IU2 234 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CSPG4P5Q96PW8 444 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 ZNF382Q96SR6 550 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 P2RY13Q9BPV8 354 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 VCPKMTQ9H867 229 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 NARFQ9UHQ1 456 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 CDH7Q9ULB5 785 aa-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 F11RQ9Y624 299 aaKnown RBP-0.69□□□□□ -2.52
SNORA40-201ENST00000388090 TICRRQ7Z2Z1 1910 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 MYO9BQ13459 2157 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 PHF3Q92576 2039 aaKnown RBP-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 TMEM120BA0PK00 339 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 ZNF320A2RRD8 509 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 GNAO1P09471 354 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 ZNF35P13682 527 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 XRCC1P18887 633 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 MRPS6P82932 125 aaKnown RBP-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 ARL6IP1Q15041 203 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 FAM78AQ5JUQ0 283 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 STUMQ69YW2 141 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 FAM199XQ6PEV8 388 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 C16orf47Q6ZP98 133 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 TCF24Q7RTU0 167 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 CCDC186Q7Z3E2 898 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 SVOPLQ8N434 492 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 NEK11Q8NG66 645 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 OR13G1Q8NGZ3 307 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 CMTM2Q8TAZ6 248 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 AP2M1Q96CW1 435 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 RNF145Q96MT1 663 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 SRMSQ9H3Y6 488 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 SIAEQ9HAT2 523 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 TMEM161AQ9NX61 479 aa-0.7□□□□□ -2.52
SNORA40-201ENST00000388090 CD84Q9UIB8 345 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms