RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PIGTQ969N2 578 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 S1PR3Q99500 378 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 DDX31Q9H8H2 851 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD3-203ENST00000380358 QPCTLQ9NXS2 382 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 KIAA1456Q9P272 454 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 C4orf47A7E2U8 309 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZFAND5O76080 213 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 NDUFB2O95178 105 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 IGHG1P01857 330 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SLC35E2BP0CK96 405 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SERINC5Q86VE9 423 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 UBL7Q96S82 380 aaPredicted RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 GSRP00390 522 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SEMG1P04279 462 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 NME2P22392 152 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 THBS3P49746 956 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 LCTLQ6UWM7 567 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SKA3Q8IX90 412 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 NECTIN4Q96NY8 510 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 SEMA6CQ9H3T2 930 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 PREBQ9HCU5 417 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 WDR37Q9Y2I8 494 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 FBXO7Q9Y3I1 522 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZNF840PA6NDX5 716 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 AKAIN1P0CW23 69 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 GLI4P10075 376 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 PRDX3P30048 256 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 RAB11AP62491 216 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZNF33AQ06730 810 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 VASH2Q86V25 355 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 OR4K5Q8NGD3 323 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 AGXT2Q9BYV1 514 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 GAL3ST2Q9H3Q3 398 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 CPNE7Q9UBL6 633 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 LOXHD1Q8IVV2 1947 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 ITGAMP11215 1152 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 PRPS1P60891 318 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 TAF9Q16594 264 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 GTDC1Q4AE62 458 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 CPNE4Q96A23 557 aaPredicted RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZBTB8AQ96BR9 441 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 LGALS12Q96DT0 336 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 ZBED3Q96IU2 234 aaPredicted RBP11.62□□□□□ -0.55
CHD3-203ENST00000380358 DMAC2Q9NW81 257 aa11.62□□□□□ -0.55
CHD3-203ENST00000380358 PRSS38A1L453 326 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CDK2AP1O14519 115 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 DDAH2O95865 285 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CD38P28907 300 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 GALNT2Q10471 571 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 OR5I1Q13606 314 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 FAM43BQ6ZT52 329 aaPredicted RBP11.61□□□□□ -0.55
CHD3-203ENST00000380358 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 EMG1Q92979 244 aaKnown RBP11.61□□□□□ -0.55
CHD3-203ENST00000380358 MS4A4EQ96PG1 132 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 MED18Q9BUE0 208 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 HOXD1Q9GZZ0 328 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 MAF1Q9H063 256 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SLC39A9Q9NUM3 307 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 RPL26L1Q9UNX3 145 aaKnown RBP11.61□□□□□ -0.55
CHD3-203ENST00000380358 SLC36A2Q495M3 483 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 ANKRD16Q6P6B7 361 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CNIH2Q6PI25 160 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 ARFGAP1Q8N6T3 406 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 TMEM239Q8WW34 195 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 FYTTD1Q96QD9 318 aaKnown RBP11.61□□□□□ -0.55
CHD3-203ENST00000380358 DUSP23Q9BVJ7 150 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CPNE5Q9HCH3 593 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 A6NIZ1 184 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 NUDT19A8MXV4 375 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 DRD2P14416 443 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SLC1A3P43003 542 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SSR4P51571 173 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 RAP1BP61224 184 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 RAP1AP62834 184 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SLC7A9P82251 487 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SERTAD2Q14140 314 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CTC1Q2NKJ3 1217 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 CCBE1Q6UXH8 406 aaPredicted RBP11.61□□□□□ -0.55
CHD3-203ENST00000380358 IRF2BP1Q8IU81 584 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 AKR1E2Q96JD6 320 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 PLK3Q9H4B4 646 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 MBD5Q9P267 1494 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 J3KTA2 159 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 DPM1O60762 260 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 GOSR1O95249 250 aa11.61□□□□□ -0.55
CHD3-203ENST00000380358 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms