RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 RAB6CQ9H0N0 254 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 FAM212BQ9NTI7 297 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 SLC6A5Q9Y345 797 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 MPPED1O15442 326 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 CBR1P16152 277 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 CXCR4P61073 352 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 MFSD6LQ8IWD5 586 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 RNF141Q8WVD5 230 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 CDCA3Q99618 268 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 EVA1AQ9H8M9 152 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 AGPAT4Q9NRZ5 378 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 CABIN1Q9Y6J0 2220 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 SULT2B1O00204 365 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 COL19A1Q14993 1142 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 HCAR1Q9BXC0 346 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 TSPAN10Q9H1Z9 355 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 ZNF337Q9Y3M9 751 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 SOHLH1Q5JUK2 328 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 B3GNT9Q6UX72 402 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 BCL7CQ8WUZ0 217 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 FAM3CQ92520 227 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 DTD2Q96FN9 168 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 LYRM2Q9NU23 88 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 LPLP06858 475 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 TNFSF4P23510 183 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 NFYAP23511 347 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 PPT1P50897 306 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 TP53I3Q53FA7 332 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 ACSM3Q53FZ2 586 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 ALKAL2Q6UX46 152 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 INPP5EQ9NRR6 644 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 SLC22A11Q9NSA0 550 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 PLEK2Q9NYT0 353 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 VSX1Q9NZR4 365 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 TP53P04637 393 aaPredicted RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 CX3CR1P49238 355 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 IL13RA1P78552 427 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 HNRNPA1L2Q32P51 320 aaKnown RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 CTRCQ99895 268 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 KCNIP2Q9NS61 270 aa13.97□□□□□ -0.17
EXT1-201ENST00000378204 CNOT2Q9NZN8 540 aaKnown RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 LSM5Q9Y4Y9 91 aaKnown RBP13.97□□□□□ -0.17
EXT1-201ENST00000378204 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 RD3LP0DJH9 198 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 BPIFA2Q96DR5 249 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 ZDHHC11Q9H8X9 412 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 MCTS1Q9ULC4 181 aaKnown RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 PUS1Q9Y606 427 aaKnown RBP eCLIP13.96□□□□□ -0.17
EXT1-201ENST00000378204 CLN5O75503 358 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 STK17BO94768 372 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 ITGAMP11215 1152 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 KIAA0907Q7Z7F0 614 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 FOXRED1Q96CU9 486 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 SORT1Q99523 831 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 CHRDQ9H2X0 955 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 KCMF1Q9P0J7 381 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 GPR45Q9Y5Y3 372 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 TRPM6Q9BX84 2022 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 SEC14L2O76054 403 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 BPHLQ86WA6 291 aaPredicted RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 TCTE3Q8IZS6 198 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 SYNPRQ8TBG9 265 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 TOLLIPQ9H0E2 274 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 GAR1Q9NY12 217 aaKnown RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 TAS2R16Q9NYV7 291 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 HMGN2P05204 90 aaKnown RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 DDOSTP39656 456 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 TNK1Q13470 666 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 TMEM244Q5VVB8 128 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 TRMT2BQ96GJ1 504 aaKnown RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 EMC7Q9NPA0 242 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 BMP4P12644 408 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 HNRNPA3P51991 378 aaKnown RBP13.96□□□□□ -0.17
EXT1-201ENST00000378204 EMP2P54851 167 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 FOXA1P55317 472 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 SLC22A6Q4U2R8 563 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 RTL6Q6ICC9 239 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 KDM8Q8N371 416 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 ARL6IP6Q8N6S5 226 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 OR5L1Q8NGL2 311 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 OR51Q1Q8NH59 317 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 ZNF75AQ96N20 296 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 PDLIM7Q9NR12 457 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 SRPK3Q9UPE1 567 aa13.96□□□□□ -0.17
EXT1-201ENST00000378204 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.18
EXT1-201ENST00000378204 MYADML2A6NDP7 307 aa13.96□□□□□ -0.18
EXT1-201ENST00000378204 WASH4PA8MWX3 477 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms