RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SYT9Q86SS6 491 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 PFN4Q8NHR9 129 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 ARSGQ96EG1 525 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 MS4A4EQ96PG1 132 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 PRSS27Q9BQR3 290 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 IFT22Q9H7X7 185 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 IFT46Q9NQC8 304 aa15.33■□□□□ 0.04
PCDHA1-201ENST00000378133 FAM25EA8MYX2 175 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 PRR23D1E9PI22 279 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 PRAF2O60831 178 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 NMBP08949 121 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 PRR23D2P0DMB1 279 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 PSMB1P20618 241 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 MAKP20794 623 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TEAD1P28347 426 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 MAPK14Q16539 360 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SDF2Q99470 211 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 C1QTNF2Q9BXJ5 285 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 LDAHQ9H6V9 325 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 CACYBPQ9HB71 228 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 NPDC1Q9NQX5 325 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 MED9Q9NWA0 146 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SIDT1Q9NXL6 827 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 ABRACLQ9P1F3 81 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 NOSIPQ9Y314 301 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TBC1D3KA0A087X1G2 549 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SYNDIG1LA6NDD5 238 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TBC1D3FA6NER0 549 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 UNC119BA6NIH7 251 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 GSTZ1O43708 216 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SAGP10523 405 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 ID2Q02363 134 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TRMT12Q53H54 448 aaKnown RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SFRP5Q5T4F7 317 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TBC1D3GQ6DHY5 549 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 TANGO2Q6ICL3 276 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 ALKAL2Q6UX46 152 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SLC44A3Q8N4M1 653 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 OR13C5Q8NGS8 318 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 ZCCHC10Q8TBK6 192 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SMIM4Q8WVI0 70 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 RSPH9Q9H1X1 276 aaPredicted RBP15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 RCE1Q9Y256 329 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 SLC17A4Q9Y2C5 497 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 HRH3Q9Y5N1 445 aa15.32■□□□□ 0.04
PCDHA1-201ENST00000378133 XIRP2A4UGR9 3374 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 A8MXK9 166 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 HYAL3O43820 417 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 LPLP06858 475 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 PROS1P07225 676 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 MRPL3P09001 348 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 GPR85P60893 370 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 POLR2GP62487 172 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 EEF1A1P68104 462 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 ARHGAP11BQ3KRB8 267 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FAM69AQ5T7M9 428 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 SLC25A25Q6KCM7 469 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FAM98AQ8NCA5 519 aaKnown RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FANK1Q8TC84 345 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 SMAP2Q8WU79 429 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 LCN9Q8WX39 176 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 ST8SIA2Q92186 375 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 CD180Q99467 661 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 SEC22CQ9BRL7 303 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 PIPOXQ9P0Z9 390 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 TRBV23OR9-2A0A075B6M9 112 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 NPIPA5A0A0B4J1W7 369 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 LINC01553A4QN01 128 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 PRR19A6NJB7 356 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 NPIPA7E9PJI5 369 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 SC5DO75845 299 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 EML2O95834 649 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FCER2P06734 321 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 NPIPA8P0DM63 369 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 EPXP11678 715 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 BMP7P18075 431 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 HTR2AP28223 471 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 CCR9P51686 369 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 DHODHQ02127 395 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 DEFB134Q4QY38 66 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FCRLBQ6BAA4 426 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 SHISA5Q8N114 240 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 STPG2Q8N412 459 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 OR4K14Q8NGD5 310 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 OR52L1Q8NGH7 329 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 PTP4A1Q93096 173 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 OR51V1Q9H2C8 321 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 HRASLSQ9HDD0 168 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 KRCC1Q9NPI7 259 aaPredicted RBP15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 TMEM74BQ9NUR3 256 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 FBXO34Q9NWN3 711 aa15.31■□□□□ 0.04
PCDHA1-201ENST00000378133 A0A1W2PQU0 124 aa15.3■□□□□ 0.04
PCDHA1-201ENST00000378133 MCRIP1C9JLW8 97 aa15.3■□□□□ 0.04
PCDHA1-201ENST00000378133 TEX46H3BTG2 121 aa15.3■□□□□ 0.04
PCDHA1-201ENST00000378133 BHLHE40O14503 412 aa15.3■□□□□ 0.04
PCDHA1-201ENST00000378133 ARPC1BO15143 372 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms