RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC35A1P78382 337 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 P2RY6Q15077 328 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 BEX5Q5H9J7 111 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF311Q5JNZ3 666 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 GALNT5Q7Z7M9 940 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 GABRG1Q8N1C3 465 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 CADM2Q8N3J6 435 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 KISS1RQ969F8 398 aaPredicted RBP14.94□□□□□ -0.02
HMGN4-201ENST00000377575 SLC35B4Q969S0 331 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 CXXC4Q9H2H0 198 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 SLAMF8Q9P0V8 285 aa14.94□□□□□ -0.02
HMGN4-201ENST00000377575 PRRC2AP48634 2157 aaKnown RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 HIVEP1P15822 2718 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 IGKV3D-15A0A087WSY6 115 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 TRBV5-3A0A0A0MS03 114 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 ANGPT2O15123 496 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 EIF1BO60739 113 aaKnown RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 PGM3O95394 542 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 TROVE2P10155 538 aaKnown RBP eCLIP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 KLK2P20151 261 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 ACAA2P42765 397 aaKnown RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 NR1H2P55055 460 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 SFRP5Q5T4F7 317 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 Q6ZT83 130 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 KRT73Q86Y46 540 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 CLIP4Q8N3C7 705 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 NFKBIDQ8NI38 313 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 DNAJA3Q96EY1 480 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 USB1Q9BQ65 265 aaKnown RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 NAA11Q9BSU3 229 aaPredicted RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 SPATA5L1Q9BVQ7 753 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 ADAM19Q9H013 955 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF385DQ9H6B1 395 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 MRGBPQ9NV56 204 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 NDUFAF1Q9Y375 327 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 MED13LQ71F56 2210 aa14.93□□□□□ -0.02
HMGN4-201ENST00000377575 TEP1Q99973 2627 aaKnown RBP14.93□□□□□ -0.02
HMGN4-201ENST00000377575 RAI1Q7Z5J4 1906 aaPredicted RBP14.92□□□□□ -0.02
HMGN4-201ENST00000377575 A0A1W2PPR1 153 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 GPR171O14626 319 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
HMGN4-201ENST00000377575 ADAP00813 363 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 THBDP07204 575 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 PRKAR1BP31321 381 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 SLC16A1P53985 500 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 CDK6Q00534 326 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 ITGADQ13349 1161 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 DEFB113Q30KQ7 82 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 METTL21CQ5VZV1 264 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 REEP3Q6NUK4 255 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 C22orf34Q6ZV56 151 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 DHDDSQ86SQ9 333 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 SERPINA11Q86U17 422 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF100Q8IYN0 542 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 TSPEARQ8WU66 669 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 S100PBPQ96BU1 408 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 CPPED1Q9BRF8 314 aaPredicted RBP14.92□□□□□ -0.02
HMGN4-201ENST00000377575 TMEM38AQ9H6F2 299 aa14.92□□□□□ -0.02
HMGN4-201ENST00000377575 NOSIPQ9Y314 301 aaKnown RBP14.92□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF716A6NP11 495 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF814B7Z6K7 855 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 GPIP06744 558 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 GPX2P18283 190 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 SLC6A2P23975 617 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 IDUAP35475 653 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 SCARB2Q14108 478 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 HSP90B2PQ58FF3 399 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 PAQR6Q6TCH4 344 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 DLEU7Q6UYE1 221 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 WFDC8Q8IUA0 241 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 DPP10Q8N608 796 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 APH1AQ96BI3 265 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF775Q96BV0 537 aaPredicted RBP14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF607Q96SK3 696 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 TMEM120AQ9BXJ8 343 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 POTEKPQ9BYX7 375 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 IKZF5Q9H5V7 419 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 UBTD1Q9HAC8 227 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ZNF446Q9NWS9 450 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 PRSS50Q9UI38 385 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ANGPT4Q9Y264 503 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 CHST2Q9Y4C5 530 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 ITPR3Q14573 2671 aa14.91□□□□□ -0.02
HMGN4-201ENST00000377575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.9□□□□□ -0.02
HMGN4-201ENST00000377575 ZC3H12DA2A288 527 aaKnown RBP14.9□□□□□ -0.02
HMGN4-201ENST00000377575 A8MVM7 634 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 IMPDH2P12268 514 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 PRG2P13727 222 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 FPR1P21462 350 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 H3F3AP84243 136 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 C20orf204Q6ZNR8 217 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 BHLHA15Q7RTS1 189 aaPredicted RBP14.9□□□□□ -0.02
HMGN4-201ENST00000377575 C10orf111Q8N326 155 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 BHLHE22Q8NFJ8 381 aaPredicted RBP14.9□□□□□ -0.02
HMGN4-201ENST00000377575 HSD17B8Q92506 261 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 C3orf49Q96BT1 292 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 HS3ST6Q96QI5 342 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 TAPBPLQ9BX59 468 aa14.9□□□□□ -0.02
HMGN4-201ENST00000377575 NGBQ9NPG2 151 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms