RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 HYAL4Q2M3T9 481 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SLC6A19Q695T7 634 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 PGBD2Q6P3X8 592 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZER1Q7Z7L7 766 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DDIT4LQ96D03 193 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 BPIFA2Q96DR5 249 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 TMEM43Q9BTV4 400 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 GABARAPL1Q9H0R8 117 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DEFB127Q9H1M4 99 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 TSPAN10Q9H1Z9 355 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 LDAHQ9H6V9 325 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 BOD1L1Q8NFC6 3051 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DSPP15924 2871 aaKnown RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 C7orf72A4D263 438 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ARRDC5A6NEK1 342 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 EFNA2O43921 213 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SAGP10523 405 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 IGFBP5P24593 272 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 RPS5P46782 204 aaKnown RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 DAPP51397 102 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ALDH3A2P51648 485 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 EGR4Q05215 589 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SELENBP1Q13228 472 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF770Q6IQ21 691 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 GALNT5Q7Z7M9 940 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 TACO1Q9BSH4 297 aaKnown RBP11.7□□□□□ -0.54
CBWD3-203ENST00000377344 OSBPL10Q9BXB5 764 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SLC19A3Q9BZV2 496 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SLC6A15Q9H2J7 730 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 EXO5Q9H790 373 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 KRT84Q9NSB2 600 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 MGAT4BQ9UQ53 548 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 SLC6A5Q9Y345 797 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF337Q9Y3M9 751 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ORC6Q9Y5N6 252 aa11.7□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF208O43345 1280 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 CH25HO95992 272 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 ALPLP05186 524 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF26P17031 533 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-203ENST00000377344 CBLP22681 906 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 ELK4P28324 431 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 OMPP47874 163 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 MAP2K6P52564 334 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 B3GALT5-AS1P59052 145 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 PPP2R2BQ00005 443 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 PRKCDQ05655 676 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 TMEM176BQ3YBM2 270 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-203ENST00000377344 SYT14P1Q58G82 188 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 C1orf140Q5VVS0 124 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 C1orf94Q6P1W5 598 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 GNPDA2Q8TDQ7 276 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 STK35Q8TDR2 534 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 PNPLA2Q96AD5 504 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 SLC25A36Q96CQ1 311 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 QPCTLQ9NXS2 382 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 TMEM5Q9Y2B1 443 aa11.69□□□□□ -0.54
CBWD3-203ENST00000377344 TRAV36DV7A0A075B6V5 113 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 LRRN3E7EW58 273 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 MITFO75030 526 aaPredicted RBP11.68□□□□□ -0.54
CBWD3-203ENST00000377344 AHSA1O95433 338 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 ADAP00813 363 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 POU3F2P20265 443 aaPredicted RBP11.68□□□□□ -0.54
CBWD3-203ENST00000377344 MAKP20794 623 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 GCKP35557 465 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 IZUMO2Q6UXV1 221 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 UBQLNLQ8IYU4 475 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 PACRGLQ8N7B6 248 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 EXD3Q8N9H8 876 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 TEX19Q8NA77 164 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 SLC25A43Q8WUT9 341 aaPredicted RBP11.68□□□□□ -0.54
CBWD3-203ENST00000377344 TAAR8Q969N4 342 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 SGTBQ96EQ0 304 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 ARL5BQ96KC2 179 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 OR5B2Q96R09 309 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 TAAR6Q96RI8 345 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 GPA33Q99795 319 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 PSD2Q9BQI7 771 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 UCK2Q9BZX2 261 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 C8orf4Q9NR00 106 aa11.68□□□□□ -0.54
CBWD3-203ENST00000377344 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
CBWD3-203ENST00000377344 EFCAB9A8MZ26 197 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 CDC42EP2O14613 210 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 HPRP00739 348 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FUT1P19526 365 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms