RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TMEM72A0PK05 275 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 WDR91A4D1P6 747 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-204ENST00000376491 M0R1B8 84 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 AP3D1O14617 1153 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 GPR171O14626 319 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 DNPH1O43598 174 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 IMPDH2P12268 514 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 IDH2P48735 452 aaKnown RBP13.11□□□□□ -0.31
CLCN6-204ENST00000376491 CLK1P49759 484 aaKnown RBP13.11□□□□□ -0.31
CLCN6-204ENST00000376491 FABP6P51161 128 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 OR2B6P58173 313 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 VSNL1P62760 191 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 SLC25A3Q00325 362 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TMEM249Q2WGJ8 235 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 CHRFAM7AQ494W8 412 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 SPANXN4Q5MJ08 99 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 C6orf52Q5T4I8 152 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 FBXL14Q8N1E6 418 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 ARFGAP2Q8N6H7 521 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 ZNF525Q8N782 197 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TESCQ96BS2 214 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 NEURL3Q96EH8 262 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TNFRSF13CQ96RJ3 184 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TMEM181Q9P2C4 612 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 MARCOQ9UEW3 520 aaPredicted RBP13.11□□□□□ -0.31
CLCN6-204ENST00000376491 OSGIN1Q9UJX0 560 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
CLCN6-204ENST00000376491 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 ZC3H12DA2A288 527 aaKnown RBP13.1□□□□□ -0.31
CLCN6-204ENST00000376491 HMGN4O00479 90 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 SERPINE1P05121 402 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 MAGEA8P43361 318 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 KHKP50053 298 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 ABCE1P61221 599 aaKnown RBP13.1□□□□□ -0.31
CLCN6-204ENST00000376491 LOXL1Q08397 574 aaPredicted RBP13.1□□□□□ -0.31
CLCN6-204ENST00000376491 CHI3L2Q15782 390 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 SYPL1Q16563 259 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 ANXA8L1Q5VT79 327 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 OR7E24Q6IFN5 339 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 ANKFN1Q8N957 763 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 SORT1Q99523 831 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 SLC35A5Q9BS91 424 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
CLCN6-204ENST00000376491 IFNA2P01563 188 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 CHRM4P08173 479 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 FKBP2P26885 142 aaKnown RBP13.09□□□□□ -0.31
CLCN6-204ENST00000376491 DSCR9P59020 149 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 RAB35Q15286 201 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 RNF130Q86XS8 419 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
CLCN6-204ENST00000376491 NANOS1Q8WY41 292 aaKnown RBP13.09□□□□□ -0.31
CLCN6-204ENST00000376491 TEX37Q96LM6 180 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 MANSC1Q9H8J5 431 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 SLC17A5Q9NRA2 495 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 DCTN4Q9UJW0 460 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 ATP23Q9Y6H3 246 aa13.09□□□□□ -0.31
CLCN6-204ENST00000376491 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 H7C417 338 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 ZNF208O43345 1280 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 LY6HO94772 140 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 MYZAPP0CAP1 466 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 FAM157CP0CG43 387 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
CLCN6-204ENST00000376491 TACR3P29371 465 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-204ENST00000376491 HTR3AP46098 478 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 RPL14P50914 215 aaKnown RBP13.08□□□□□ -0.32
CLCN6-204ENST00000376491 SLC35A1P78382 337 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 HPCAP84074 193 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 VLDLRP98155 873 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 SLC17A1Q14916 467 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 FAM174BQ3ZCQ3 159 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 ZIC4Q8N9L1 334 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 C1orf162Q8NEQ5 155 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-204ENST00000376491 VPS37AQ8NEZ2 397 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 CCDC115Q96NT0 180 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 NUF2Q9BZD4 464 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 UPB1Q9UBR1 384 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
CLCN6-204ENST00000376491 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms