RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 APMAPQ9HDC9 416 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 BOKQ9UMX3 212 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FZD1Q9UP38 647 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 NSG1A0A0A6YYJ2 146 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 NAP1L6A6NFF2 107 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZFP92A6NM28 416 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FAM170BA6NMN3 283 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FAM90A27PA6NNH2 459 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 E5RJQ4 531 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 GPR31O00270 319 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 DCTN6O00399 190 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PSCAO43653 123 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CDC14BO60729 498 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CILPO75339 1184 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MRPL33O75394 65 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ARNTP27540 789 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 NSG1P42857 185 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 OR3A1P47881 315 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 IDH3AP50213 366 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MAP2K6P52564 334 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PNLIPRP1P54315 467 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 NAAAQ02083 359 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF169Q14929 603 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RTP5Q14D33 572 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ACKR1Q16570 336 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 LAIR1Q6GTX8 287 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TMEM205Q6UW68 189 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 SGMS1Q86VZ5 419 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 C4orf19Q8IY42 314 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 SAMD12Q8N8I0 201 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 OR10R2Q8NGX6 335 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 BTF3L4Q96K17 158 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ABHD14AQ9BUJ0 271 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 SLC25A31Q9H0C2 315 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CHST8Q9H2A9 424 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 LANCL2Q9NS86 450 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PCOLCE2Q9UKZ9 415 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RAB22AQ9UL26 194 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 NUP153P49790 1475 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CNTNAP5Q8WYK1 1306 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ADAMTS12P58397 1594 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 SLC38A8A6NNN8 435 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 GPR37O15354 613 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 HTRA2O43464 458 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MT-ND2P03891 347 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RPL17P18621 184 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TACR2P21452 398 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PXNP49023 591 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 HTRA4P83105 476 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FADDQ13158 208 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PCGF3Q3KNV8 242 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TRILQ7L0X0 811 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FA2HQ7L5A8 372 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 DPPA2Q7Z7J5 298 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZDHHC21Q8IVQ6 265 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 OR5AS1Q8N127 324 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 FBXL14Q8N1E6 418 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MTMR14Q8NCE2 650 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MRGPRX2Q96LB1 330 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF347Q96SE7 839 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PIGQQ9BRB3 760 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 UTP23Q9BRU9 249 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CHRDQ9H2X0 955 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RHOFQ9HBH0 211 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 WDR6Q9NNW5 1121 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 OLAHQ9NV23 265 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 APOBEC3BQ9UH17 382 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PURGQ9UJV8 347 aaKnown RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ABCA7Q8IZY2 2146 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PROSCO94903 275 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CAMTA2O94983 1202 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 HPP00738 406 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PRSS2P07478 247 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 UCHL1P09936 223 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 HOXC13P31276 330 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MAP2K4P45985 399 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RARRES1P49788 294 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CDK7P50613 346 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 POU6F2P78424 691 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CATR1Q13166 79 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 VEZF1Q14119 521 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF260Q3ZCT1 412 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 P2RY8Q86VZ1 359 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PRELID2Q8N945 189 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 AQP11Q8NBQ7 271 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 BVESQ8NE79 360 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 OR4C13Q8NGP0 309 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TMEM163Q8TC26 289 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF516Q92618 1163 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RTP4Q96DX8 246 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF641Q96N77 438 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 MYOZ1Q9NP98 299 aaPredicted RBP4.36□□□□□ -1.71
SCN1A-202ENST00000375405 CHST7Q9NS84 486 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 GPR83Q9NYM4 423 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TRPM6Q9BX84 2022 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 TRIOBPQ9H2D6 2365 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 PHYHO14832 338 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 ACOX3O15254 700 aa4.36□□□□□ -1.71
SCN1A-202ENST00000375405 AGFG2O95081 481 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms