RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 HMGN2P46Q86SG4 172 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 NR4A3Q92570 626 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 C4orf36Q96KX1 117 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 BBS4Q96RK4 519 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 TRMT61BQ9BVS5 477 aaKnown RBP11.94□□□□□ -0.5
PRPF4-201ENST00000374198 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 EGLN1Q9GZT9 426 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 UCK1Q9HA47 277 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 UFSP2Q9NUQ7 469 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 FCF1Q9Y324 198 aaKnown RBP11.94□□□□□ -0.5
PRPF4-201ENST00000374198 ARL6IP5O75915 188 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PTHLHP12272 177 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 SGSHP51688 502 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 MANFP55145 182 aaKnown RBP11.94□□□□□ -0.5
PRPF4-201ENST00000374198 TAS2R41P59536 307 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 RPE65Q16518 533 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 OVCH1Q7RTY7 1134 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PIGXQ8TBF5 258 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 OR5P2Q8WZ92 322 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 SUSD3Q96L08 255 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 PINK1Q9BXM7 581 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 MED20Q9H944 212 aa11.94□□□□□ -0.5
PRPF4-201ENST00000374198 STOX2Q9P2F5 926 aaPredicted RBP11.94□□□□□ -0.5
PRPF4-201ENST00000374198 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 POM121BA6NF01 834 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF197O14709 1029 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 RD3LP0DJH9 198 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 CSF2RAP15509 400 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 NT5EP21589 574 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 PPT1P50897 306 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 STXBP1P61764 594 aaKnown RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 MRPS10P82664 201 aaKnown RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 CBFBQ13951 182 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF345Q14585 488 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 RTP2Q5QGT7 225 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 SLCO4C1Q6ZQN7 724 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 OLIG3Q7RTU3 272 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 OR2T33Q8NG76 320 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 NEIL2Q969S2 332 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 LRIG1Q96JA1 1093 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 SPSB2Q99619 263 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 DMRT3Q9NQL9 472 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 INPP5EQ9NRR6 644 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 P2RX2Q9UBL9 471 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 A0A1W2PPC1 479 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ACOT7O00154 380 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 SYT5O00445 386 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 PHYHO14832 338 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 GPR37O15354 613 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 CLN5O75503 358 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 OR2F2O95006 317 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 NR2F1P10589 423 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ADH7P40394 386 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 BUD31P41223 144 aaPredicted RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 OR12D2P58182 307 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 DEFA6Q01524 100 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 OR2F1Q13607 317 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 TEX30Q5JUR7 227 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 SERPINA13PQ6UXR4 307 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF565Q8N9K5 539 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 XAGE5Q8WWM1 108 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 AUTS2Q8WXX7 1259 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 MRPL38Q96DV4 380 aaKnown RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 VRK1Q99986 396 aaPredicted RBP11.93□□□□□ -0.5
PRPF4-201ENST00000374198 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 KCNK12Q9HB15 430 aa11.93□□□□□ -0.5
PRPF4-201ENST00000374198 A0A1B0GTQ1 180 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 A0A1W2PPE3 182 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 WASH3PC4AMC7 463 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 OR2T1O43869 369 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 LATS1O95835 1130 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 GPR4P46093 362 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 STARD6P59095 220 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 CDNFQ49AH0 187 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TMEM69Q5SWH9 247 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 PIP5KL1Q5T9C9 394 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 BEND4Q6ZU67 534 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 C16orf59Q7L2K0 433 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 DCUN1D3Q8IWE4 304 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 OR1J4Q8NGS1 313 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 OR5J2Q8NH18 312 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 FOXJ3Q9UPW0 622 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 IGLV3-16A0A075B6K0 115 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms