RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 GPR176Q14439 515 aa14.33□□□□□ -0.11
COL5A1-201ENST00000371817 MAFBQ9Y5Q3 323 aaPredicted RBP14.33□□□□□ -0.11
COL5A1-201ENST00000371817 PRAMEF27A3QJZ7 478 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 GRXCR2A6NFK2 248 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 GIPP09681 153 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CCR6P51684 374 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 F2RL1P55085 397 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 TPPP2P59282 170 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 PRAMEF9Q5VWM5 478 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CLEC20AQ6ZU45 233 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 LRRC56Q8IYG6 542 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 GPR137CQ8N3F9 429 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CYB561A3Q8NBI2 242 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF160Q9HCG1 818 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ADGRB1O14514 1584 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 UPK3BL1B0FP48 263 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 UPK3BL2E5RIL1 263 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 GPR25O00155 361 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 T-ENOLP0DO92 83 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 TAS2R38P59533 333 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 PLPP4Q5VZY2 271 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF322Q6U7Q0 402 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 BLNKQ8WV28 456 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CMSS1Q9BQ75 279 aaKnown RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF487B1APH4 448 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 DAP3P51398 398 aaKnown RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 AKR1C1Q04828 323 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CPXM2Q8N436 756 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 FUBP3Q96I24 572 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 MAP3K3Q99759 626 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 NAA50Q9GZZ1 169 aaKnown RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SLC7A7Q9UM01 511 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SLC38A8A6NNN8 435 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CST2P09228 141 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 EMP2P54851 167 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF620Q6ZNG0 422 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 TSTD1Q8NFU3 115 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 HLA-CQ95604 372 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 FAM71F1Q96KD3 344 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 DCLRE1CQ96SD1 692 aaKnown RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 DMAC2Q9NW81 257 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SLC23A2Q9UGH3 650 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SCO1O75880 301 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF852Q6ZMS4 543 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CERS5Q8N5B7 392 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CMTM2Q8TAZ6 248 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 DDOQ99489 341 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 GJE1A6NN92 205 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 SEC13P55735 322 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 REEP5Q00765 189 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM163Q8TC26 289 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 CMTM3Q96MX0 182 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 DDX31Q9H8H2 851 aaKnown RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 PRTFDC1Q9NRG1 225 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 AJAP1Q9UKB5 411 aaPredicted RBP14.33□□□□□ -0.12
COL5A1-201ENST00000371817 RIPK3Q9Y572 518 aa14.33□□□□□ -0.12
COL5A1-201ENST00000371817 PPRC1Q5VV67 1664 aaKnown RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TCAPO15273 167 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 C1GALT1C1LP0DN25 315 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ZP3P21754 424 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF680Q8NEM1 530 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SLC6A14Q9UN76 642 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 K7EQM0 130 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 IL34Q6ZMJ4 242 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 CDHR3Q6ZTQ4 885 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 OR10A5Q9H207 317 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 OR10A2Q9H208 303 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 EGLN3Q9H6Z9 239 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 KLHL42Q9P2K6 505 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 HHLA2Q9UM44 414 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SCO2O43819 266 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 CLDN1O95832 211 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 CD80P33681 288 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 DLX2Q07687 328 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 PIN1Q13526 163 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 COMMD1Q8N668 190 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 OR5H15A6NDH6 313 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 OR5H1A6NKK0 313 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ACRV1P26436 265 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 PLAC9Q5JTB6 97 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ARL14EPQ8N8R7 260 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF610Q8N9Z0 462 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 BPIFCQ8NFQ6 507 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SMOC2Q9H3U7 446 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ANKRD19PQ9H560 264 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ATRNL1Q5VV63 1379 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 B4DGG1 531 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TAAR5O14804 337 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 RPL7P18124 248 aaKnown RBP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 PSMB10P40306 273 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TBPL1P62380 186 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SQSTM1Q13501 440 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms