RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 INTS14Q96SY0 518 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 PRRT1Q99946 306 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 GAR1Q9NY12 217 aaKnown RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 B3GALT1Q9Y5Z6 326 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 MED1Q15648 1581 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 ATP1B1P05026 303 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 F3P13726 295 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 ZNF25P17030 456 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 MC3RP41968 323 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 CTXN1P60606 82 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 SIM1P81133 766 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 TSPAN31Q12999 210 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 ZNF362Q5T0B9 420 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 LRRC25Q8N386 305 aaPredicted RBP11.87□□□□□ -0.51
GPC4-201ENST00000370828 DNAAF1Q8NEP3 725 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 TOMM40LQ969M1 308 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 MOB1AQ9H8S9 216 aa11.87□□□□□ -0.51
GPC4-201ENST00000370828 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 NPIPA5A0A0B4J1W7 369 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ANTXRLA6NF34 631 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ZNF726A6NNF4 738 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 GPR143P51810 404 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 IFITM3Q01628 133 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 EBPQ15125 230 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 FAM110CQ1W6H9 321 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 C5orf46Q6UWT4 87 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 LMNTD1Q8N9Z9 388 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SLC22A18Q96BI1 424 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 MRPL22Q9NWU5 206 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 PLEKHM1Q9Y4G2 1056 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 DUSP11O75319 330 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 PLGP00747 810 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 EGFP01133 1207 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 SLC2A1P11166 492 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 AOAHP28039 575 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SPINT3P49223 89 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 LMAN2Q12907 356 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 DECR1Q16698 335 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 MANEALQ5VSG8 457 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ESPNLQ6ZVH7 1005 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 APCDD1Q8J025 514 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 OR2T4Q8NH00 348 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 RAB39BQ96DA2 213 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 OR14A2Q96R54 314 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SMG9Q9H0W8 520 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 PPP1R14DQ9NXH3 145 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 A0A1B0GTL3 188 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 A0A1W2PS29 197 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 LILRB5O75023 590 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 EDN3P14138 238 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PTBP1P26599 531 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPC4-201ENST00000370828 OR2B8PP59922 312 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 UBE2KP61086 200 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SNRPGP62308 76 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 YIF1BQ5BJH7 314 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PLPP4Q5VZY2 271 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SLC22A25Q6T423 547 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 NPAS4Q8IUM7 802 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 LKAAEAR1Q8TD35 194 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 MIOXQ9UGB7 285 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 A0A0G2JLL6 359 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 ANKUB1A6NFN9 424 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 IFNA1P01562 189 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 C6P13671 934 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ZP3P21754 424 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 FGF7P21781 194 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 RAD52P43351 418 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 C19orf57Q0VDD7 668 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 AWAT2Q6E213 333 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SBSNQ6UWP8 590 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PRRT2Q7Z6L0 340 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 UCN3Q969E3 161 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 BPIFA2Q96DR5 249 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 SUCNR1Q9BXA5 334 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 GABARAPL1Q9H0R8 117 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 ELOVL2Q9NXB9 296 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 TMEFF2Q9UIK5 374 aaPredicted RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 PURGQ9UJV8 347 aaKnown RBP11.86□□□□□ -0.51
GPC4-201ENST00000370828 GOLT1BQ9Y3E0 138 aa11.86□□□□□ -0.51
GPC4-201ENST00000370828 PPA1Q15181 289 aa11.85□□□□□ -0.51
GPC4-201ENST00000370828 RPE65Q16518 533 aa11.85□□□□□ -0.51
GPC4-201ENST00000370828 OLIG1Q8TAK6 271 aa11.85□□□□□ -0.51
GPC4-201ENST00000370828 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
GPC4-201ENST00000370828 COPS7AQ9UBW8 275 aa11.85□□□□□ -0.51
GPC4-201ENST00000370828 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms