RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SSX1Q16384 188 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 DDI2Q5TDH0 399 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 RAET1GQ6H3X3 334 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM205Q6UW68 189 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 C3P1Q6ZMU1 363 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 UBE2R2Q712K3 238 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 EIF3MQ7L2H7 374 aaKnown RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 VN1R4Q7Z5H5 301 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 CYP4Z1Q86W10 505 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 ZFAND4Q86XD8 727 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 C11orf65Q8NCR3 313 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 OR52B6Q8NGF0 335 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 DNAJB14Q8TBM8 379 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 ERMAPQ96PL5 475 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 SMAD5Q99717 465 aaKnown RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 MYOCQ99972 504 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 OR2AG1Q9H205 316 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 GSTO2Q9H4Y5 243 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 APMAPQ9HDC9 416 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 NIT2Q9NQR4 276 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 IMPAD1Q9NX62 359 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 PLEKHB1Q9UF11 243 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF225Q9UK10 706 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 RAXQ9Y2V3 346 aa6.33□□□□□ -1.4
CSDE1-204ENST00000369530 HYKKA2RU49 373 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 INMT-MINDY4F8WBC2 141 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 M0R233 179 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 STK25O00506 426 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SCN2BO60939 215 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 AQP8O94778 261 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MLYCDO95822 493 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SCG5P05408 212 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ANXA5P08758 320 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 RPS19P39019 145 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SERTAD2Q14140 314 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SPIN4Q56A73 249 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 NKAIN2Q5VXU1 208 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 HIST2H2AA3Q6FI13 130 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SPATA19Q7Z5L4 167 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ENTHD1Q8IYW4 607 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 PSMF1Q92530 271 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 TAAR9Q96RI9 348 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ATOH8Q96SQ7 321 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 RHNO1Q9BSD3 238 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MFRPQ9BY79 579 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 RNF167Q9H6Y7 350 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ORC6Q9Y5N6 252 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 DNAJC15Q9Y5T4 150 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 A0A0G2JPF8 293 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 A8MVJ9 347 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 HNRNPCL3B7ZW38 293 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CACNB4O00305 520 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 UBFD1O14562 309 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 HNRNPCL4P0DMR1 293 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 EPB42P16452 691 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MAPK3P27361 379 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 IMPA1P29218 277 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 BTCP35070 178 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CRYBB2P43320 205 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 HTR5AP47898 357 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 DIO3P55073 304 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 OR4D2P58180 307 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 RPL38P63173 70 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 AVPI1Q5T686 147 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CASP12Q6UXS9 341 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 NLRC3Q7RTR2 1065 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ARRDC1Q8N5I2 433 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 OR52E1Q8NGJ3 308 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CLHC1Q8NHS4 586 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 WDR36Q8NI36 951 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 WDR20Q8TBZ3 569 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 EXOSC8Q96B26 276 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SLC25A36Q96CQ1 311 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SLC25A32Q9H2D1 315 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SSR3Q9UNL2 185 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MEX3AA1L020 520 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 PPIHO43447 177 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CRTAPO75718 401 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 CRHP06850 196 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SPP1P10451 314 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 IGFBP5P24593 272 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GPR1P46091 355 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 NUDT6P53370 316 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GTF2H2Q13888 395 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 OPCMLQ14982 345 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GTF2H2CQ6P1K8 395 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 ETV3LQ6ZN32 361 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 UBE3DQ7Z6J8 389 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 C2orf73Q8N5S3 287 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 AVL9Q8NBF6 648 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 OR1L3Q8NH93 324 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GGHQ92820 318 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 PPM1MQ96MI6 270 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 SPSB2Q99619 263 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MESP1Q9BRJ9 268 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 COPS4Q9BT78 406 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms