RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ZDHHC2Q9UIJ5 367 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 SLC35A3Q9Y2D2 325 aa18.49■□□□□ 0.55
CD47-202ENST00000361309 OR12D1P0DN82 309 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 ARRB2P32121 409 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 PHC1P78364 1004 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 GGTLC2Q14390 218 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 TYW3Q6IPR3 259 aaKnown RBP18.48■□□□□ 0.55
CD47-202ENST00000361309 EMBQ6PCB8 327 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 HMGN2P46Q86SG4 172 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 XAGE5Q8WWM1 108 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 TUBGCP3Q96CW5 907 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 SLC7A10Q9NS82 523 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 MKS1Q9NXB0 559 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 TMEM181Q9P2C4 612 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 DCTN4Q9UJW0 460 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 KCNS2Q9ULS6 477 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 AMDHD2Q9Y303 409 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 WDR45Q9Y484 360 aa18.48■□□□□ 0.55
CD47-202ENST00000361309 SLC35F4A4IF30 521 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 VWC2LB2RUY7 222 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 ATP6V1G2-DDX39BF2Z307 99 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 FKBP2P26885 142 aaKnown RBP18.47■□□□□ 0.55
CD47-202ENST00000361309 CLK1P49759 484 aaKnown RBP18.47■□□□□ 0.55
CD47-202ENST00000361309 PDLIM4P50479 330 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 CLDN8P56748 225 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 H3F3AP84243 136 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 ATAD3BQ5T9A4 648 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 FAM166AQ6J272 317 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 C17orf78Q8N4C9 275 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 C1orf162Q8NEQ5 155 aaPredicted RBP18.47■□□□□ 0.55
CD47-202ENST00000361309 OR4A15Q8NGL6 344 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 MIPOL1Q8TD10 442 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 RAB8BQ92930 207 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 ZG16BQ96DA0 208 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 FBXO17Q96EF6 278 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 PARPBPQ9NWS1 579 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 TRAPPC4Q9Y296 219 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 FLVCR1Q9Y5Y0 555 aa18.47■□□□□ 0.55
CD47-202ENST00000361309 LOC100289279A0A1B0GTE1 492 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 CLDN24A6NM45 220 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 IDH2P48735 452 aaKnown RBP18.46■□□□□ 0.55
CD47-202ENST00000361309 PLAURQ03405 335 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 FUT5Q11128 374 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 SWI5Q1ZZU3 235 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 MST1LQ2TV78 715 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 FAM120AOSQ5T036 256 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 TSPO2Q5TGU0 170 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 TNFAIP8L2Q6P589 184 aaPredicted RBP18.46■□□□□ 0.55
CD47-202ENST00000361309 FRRS1Q6ZNA5 592 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 ARFGAP2Q8N6H7 521 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 OIT3Q8WWZ8 545 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 ROPN1LQ96C74 230 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 MSI2Q96DH6 328 aaKnown RBP18.46■□□□□ 0.55
CD47-202ENST00000361309 PIMREGQ9BSJ6 248 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 PRR14Q9BWN1 585 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 SAP130Q9H0E3 1048 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 POLE3Q9NRF9 147 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 MOKQ9UQ07 419 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 SLC9A8Q9Y2E8 581 aa18.46■□□□□ 0.55
CD47-202ENST00000361309 TMED7-TICAM2A0A0A6YYA0 188 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 TLDC2A0PJX2 215 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 HAX1O00165 279 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 RNASET2O00584 256 aaKnown RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 AGR2O95994 175 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 GUSBP08236 651 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 NR4A2P43354 598 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 SLC35A1P78382 337 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 KCNJ10P78508 379 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 TGFBR3Q03167 851 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 MAD2L1Q13257 205 aaPredicted RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 C3orf49Q96BT1 292 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 SORCS2Q96PQ0 1159 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 NAA11Q9BSU3 229 aaPredicted RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 EXOSC3Q9NQT5 275 aaKnown RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 NOP53Q9NZM5 478 aaKnown RBP18.45■□□□□ 0.54
CD47-202ENST00000361309 PCDHGB4Q9UN71 923 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 TMED7Q9Y3B3 224 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 FKBP7Q9Y680 259 aa18.45■□□□□ 0.54
CD47-202ENST00000361309 AP3D1O14617 1153 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 EIF1BO60739 113 aaKnown RBP18.44■□□□□ 0.54
CD47-202ENST00000361309 SPAG7O75391 227 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 IMPDH2P12268 514 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 MPGP29372 298 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 SERPINB5P36952 375 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 PRPS1P60891 318 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 EMX2Q04743 252 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 SLC17A1Q14916 467 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 AP1ARQ63HQ0 302 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 ANKRD46Q86W74 232 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 CNOT9Q92600 299 aaKnown RBP18.44■□□□□ 0.54
CD47-202ENST00000361309 DDIT4LQ96D03 193 aa18.44■□□□□ 0.54
CD47-202ENST00000361309 TMEM72A0PK05 275 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 NDUFS8O00217 210 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 CPSF4O95639 269 aaKnown RBP18.43■□□□□ 0.54
CD47-202ENST00000361309 WNT11O96014 354 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 APEHP13798 732 aaKnown RBP18.43■□□□□ 0.54
CD47-202ENST00000361309 CDH2P19022 906 aaPredicted RBP18.43■□□□□ 0.54
CD47-202ENST00000361309 UQCRC2P22695 453 aa18.43■□□□□ 0.54
CD47-202ENST00000361309 HTR3AP46098 478 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms