RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 RHOUQ7L0Q8 258 aa16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 FOXN4Q96NZ1 517 aa16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 MS4A4EQ96PG1 132 aa16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 WWTR1Q9GZV5 400 aa16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 ZDHHC18Q9NUE0 388 aa16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 APOBEC3BQ9UH17 382 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-201ENST00000360228 LEFTY2O00292 366 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF888P0CJ79 500 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF542PQ5EBM4 170 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 PIP5KL1Q5T9C9 394 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 C14orf79Q96F83 325 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 SEMA4CQ9C0C4 833 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 POPDC3Q9HBV1 291 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 RALYQ9UKM9 306 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 MBTPS1Q14703 1052 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 MOB3CQ70IA8 216 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 SERINC5Q86VE9 423 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 OR1S2Q8NGQ3 325 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 IFI44Q8TCB0 444 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 FBXL4Q9UKA2 621 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 CA14Q9ULX7 337 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 MEGF6O75095 1541 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 TIMM8AO60220 97 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ZXDBP98169 803 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 OR8J2Q8NGG1 315 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 SGPP1Q9BX95 441 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 KIAA1217Q5T5P2 1943 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 LOC285095A0A1B0GVY8 99 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 KRBA1A5PL33 1030 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 OR5K4A6NMS3 321 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 AADACP22760 399 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF761Q86XN6 746 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 MEX3DQ86XN8 651 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 SDR9C7Q8NEX9 313 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 SECTM1Q8WVN6 248 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 FCRL3Q96P31 734 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 USP2O75604 605 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 OSMP13725 252 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 LAP3P28838 519 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 ETV4P43268 484 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 LTBQ06643 244 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 WDR92Q96MX6 357 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 OLFM2O95897 454 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 POU3F2P20265 443 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 RPL7L1Q6DKI1 246 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 LOC102724200A0A096LPH7 203 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 hCG_1809904A0A1W2PP81 198 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 A0A1W2PPE2 198 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 A0A1W2PR64 198 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 A0A1W2PRV1 198 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 PTHP01270 115 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 MT-ND4LP03901 98 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 LSAMPQ13449 338 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 KLHDC8AQ8IYD2 350 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 DBF4BQ8NFT6 615 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 C11orf49Q9H6J7 331 aa16.26■□□□□ 0.19
CACNA1A-201ENST00000360228 G0S2P27469 103 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 GAR1Q9NY12 217 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 GSRP00390 522 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 HOXA11P31270 313 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ALKAL2Q6UX46 152 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ALG12Q9BV10 488 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 RANGRFQ9HD47 186 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 THSD1Q9NS62 852 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 GNB1P62873 340 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF33BQ06732 778 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 CLINT1Q14677 625 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 LY6G5CQ5SRR4 150 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ADAMTS18Q8TE60 1221 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ARPC5LQ9BPX5 153 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 C20orf24Q9BUV8 137 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 WNT7AO00755 349 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 HHEXQ03014 270 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 GPR19Q15760 415 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 KDF1Q8NAX2 398 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 B3GNT7Q8NFL0 401 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 TMEM19Q96HH6 336 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF582Q96NG8 517 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 MAF1Q9H063 256 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 V9GY05 133 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 FOLR3P41439 243 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 TPMTP51580 245 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 OPCMLQ14982 345 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 CPOQ8IVL8 374 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 MKXQ8IYA7 352 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF317Q96PQ6 595 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 FAM103A1Q9BTL3 118 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 C5AR2Q9P296 337 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 VNN1O95497 513 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 INPP5KQ9BT40 448 aa16.25■□□□□ 0.19
CACNA1A-201ENST00000360228 NDUFB2O95178 105 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 IL1RNP18510 177 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 GIPRP48546 466 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 ADIPOR2Q86V24 386 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms