RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TNFSF8P32971 234 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 GRK6P43250 576 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 PSMD7P51665 324 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 CCR4P51679 360 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 TAS2R43P59537 309 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 LGALS3BPQ08380 585 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 KRR1Q13601 381 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 FCRLBQ6BAA4 426 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 TSSK4Q6SA08 328 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 NUP54Q7Z3B4 507 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 SNX29P2Q8IUI4 249 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 C9orf40Q8IXQ3 194 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 ZFP41Q8N8Y5 198 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 FAM98AQ8NCA5 519 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 C17orf47Q8NEP4 570 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 OR10H4Q8NGA5 316 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 OR52E2Q8NGJ4 325 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 ADOQ96SZ5 270 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 TM9SF2Q99805 663 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 WWTR1Q9GZV5 400 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 SP140LQ9H930 580 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 ADGRL4Q9HBW9 690 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 TRIM36Q9NQ86 728 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 TRAPPC4Q9Y296 219 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 YARS2Q9Y2Z4 477 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 CMAHPQ9Y471 501 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 CACNA1EQ15878 2313 aa16.74■□□□□ 0.27
PDLIM7-203ENST00000359895 MPDZO75970 2070 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 ZC3H12DA2A288 527 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 SLC35F4A4IF30 521 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 RGS5O15539 181 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 EIF4E2O60573 245 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 TSPAN2O60636 221 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 SDC2P34741 201 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 RPL4P36578 427 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 PNLIPRP2P54317 469 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 HNRNPA0Q13151 305 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 TRAM1Q15629 374 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 B3GLCTQ6Y288 498 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 ARIH2OSQ8N7S6 290 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 DRAXINQ8NBI3 349 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 GPX7Q96SL4 187 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 NDEL1Q9GZM8 345 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 PILRBQ9UKJ0 227 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 SLC6A5Q9Y345 797 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 IER3IP1Q9Y5U9 82 aa16.73■□□□□ 0.27
PDLIM7-203ENST00000359895 IGKV1D-42A0A075B6H8 117 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 MCIDASD6RGH6 385 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 OIP5O43482 229 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PRKNO60260 465 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 NR0B1P51843 470 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 EFNA3P52797 238 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 DEFA1P59665 94 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 DEFA3P59666 94 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 RPS4XP62701 263 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 MXD1Q05195 221 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PLCXD2Q0VAA5 305 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 CDC20Q12834 499 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 APOOLQ6UXV4 268 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 SLC22A16Q86VW1 577 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 POMGNT2Q8NAT1 580 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 CYB561A3Q8NBI2 242 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 OR4D9Q8NGE8 314 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 SAP25Q8TEE9 199 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 SMPDL3BQ92485 455 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 RERGLQ9H628 205 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 NRIP3Q9NQ35 241 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PCDHGB7Q9Y5F8 929 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 IGLV3-12A0A075B6K2 115 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 CPED1A4D0V7 1026 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 GABRPO00591 440 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 RNF13O43567 381 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 ICOSLGO75144 302 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 RGS9O75916 674 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 HIST1H1CP16403 213 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 GGTLC2Q14390 218 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 SLC35D3Q5M8T2 416 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 STEAP3Q658P3 488 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 GUSBP11Q6P575 273 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 ZNF574Q6ZN55 896 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 COX15Q7KZN9 410 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 MARCH9Q86YJ5 346 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PRSS58Q8IYP2 241 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PRR22Q8IZ63 422 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 LRRC17Q8N6Y2 441 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 FAM181AQ8N9Y4 354 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 OR4K13Q8NH42 304 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 ZNF563Q8TA94 476 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 TBX5Q99593 518 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 KATNB1Q9BVA0 655 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 KCNN2Q9H2S1 579 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 ISG20L2Q9H9L3 353 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 PLEKHB1Q9UF11 243 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 NOX1Q9Y5S8 564 aa16.72■□□□□ 0.27
PDLIM7-203ENST00000359895 SEC16AO15027 2179 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 ALG1L2C9J202 215 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 CLEC2LP0C7M8 214 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 ZNF74Q16587 644 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms