RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MAT1AQ00266 395 aaKnown RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ZADH2Q8N4Q0 377 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ERVMER34-1Q9H9K5 563 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 A0A0J9YY10 115 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 HLA-AP01891 365 aaKnown RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 AKAIN1P0CW23 69 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 IL3RAP26951 378 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 PTP4A2Q12974 167 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 THNSL2Q86YJ6 484 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 IQCKQ8N0W5 287 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 MS4A4EQ96PG1 132 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 CCM2LQ9NUG4 571 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 K7EQM0 130 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 JRKO75564 520 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 PBX1P40424 430 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 SLC1A3P43003 542 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 CDC34P49427 236 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 MICAQ29983 383 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF181Q2M3W8 571 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 CMASQ8NFW8 434 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 HLA-CQ95604 372 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 S1PR3Q99500 378 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ARHGAP39Q9C0H5 1083 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 RABL2AQ9UBK7 228 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 RABL2BQ9UNT1 228 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 C20orf202A1L168 122 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF382Q96SR6 550 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SLC6A17Q9H1V8 727 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 KIF25Q9UIL4 384 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 CHD5Q8TDI0 1954 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 H0YAE9 185 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SCRG1O75711 98 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 M6PRP20645 277 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 PRDX3P30048 256 aaKnown RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 OR10AD1Q8NGE0 317 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 TERB2Q8NHR7 220 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 TRMT61AQ96FX7 289 aaKnown RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 EGLN3Q9H6Z9 239 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 RNF212BA8MTL3 300 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 UBE2KP61086 200 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 CPOQ8IVL8 374 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ADAMTS18Q8TE60 1221 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 YTHDF1Q9BYJ9 559 aaKnown RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ARPC4-TTLL3A0A0A6YYG9 625 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 NDUFB2O95178 105 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 AK1P00568 194 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 F2P00734 622 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SLC35E2BP0CK96 405 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 TRHRP34981 398 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ATP1B3P54709 279 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SELENOIQ9C0D9 397 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 NOCTQ9UK39 431 aaKnown RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 HOXA11P31270 313 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 CD70P32970 193 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 MSS51Q4VC12 460 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 OR7E24Q6IFN5 339 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ERMP1Q7Z2K6 904 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 VGLL2Q8N8G2 317 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 CHST11Q9NPF2 352 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 UFSP2Q9NUQ7 469 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 SOBPA7XYQ1 873 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 OR7A17O14581 309 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 PIGRP01833 764 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 UBE2IP63279 158 aaKnown RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 DEDD2Q8WXF8 326 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 LINC01599Q8WXQ3 324 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 ARV1Q9H2C2 271 aa16.15■□□□□ 0.18
COL27A1-201ENST00000356083 HEYLQ9NQ87 328 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-201ENST00000356083 LRP5LA4QPB2 252 aa16.14■□□□□ 0.18
COL27A1-201ENST00000356083 STC2O76061 302 aa16.14■□□□□ 0.18
COL27A1-201ENST00000356083 MT-ND4P03905 459 aa16.14■□□□□ 0.18
COL27A1-201ENST00000356083 POU4F3Q15319 338 aa16.14■□□□□ 0.18
COL27A1-201ENST00000356083 CNTNAP3Q9BZ76 1288 aa16.14■□□□□ 0.18
COL27A1-201ENST00000356083 YLPM1P49750 1951 aaKnown RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SHISA7A6NL88 538 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 F11P03951 625 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ZNF169Q14929 603 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 TVP23CQ96ET8 276 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 TIMD4Q96H15 378 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 WRAP73Q9P2S5 460 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 CD300AQ9UGN4 299 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 FAM159BA6NKW6 160 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 F6UZH7 168 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 MAGEB4O15481 346 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 CARD18P57730 90 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 RAC1P63000 192 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 CTC1Q2NKJ3 1217 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 FAM74A1Q5RGS3 127 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 OR1M1Q8NGA1 313 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 SUSD5O60279 629 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 PRSS56P0CW18 603 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 PIPP12273 146 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 ACVR1CQ8NER5 493 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 APIPQ96GX9 242 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 PAAF1Q9BRP4 392 aa16.14■□□□□ 0.17
COL27A1-201ENST00000356083 RGPD8O14715 1765 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-201ENST00000356083 MEGF11A6BM72 1044 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms