RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC13A4Q9UKG4 626 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CLDN16Q9Y5I7 305 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 R4GN57 208 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 OTOGLQ3ZCN5 2332 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 TRAV6A0A075B6T7 132 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ZSCAN5BA6NJL1 495 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 LEUTXA8MZ59 168 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RGS9O75916 674 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GALP22466 123 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 STAT5AP42229 794 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GCGRP47871 477 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 MTNR1BP49286 362 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RNF144AP50876 292 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ANXA11P50995 505 aaKnown RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 EPHA4P54764 986 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR10A3P58181 314 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 DECR1Q16698 335 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM44Q2T9K0 475 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ZBTB37Q5TC79 503 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 BICRALQ6AI39 1079 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PLBD1Q6P4A8 553 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 FAM111BQ6SJ93 734 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GDF7Q7Z4P5 450 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OAFQ86UD1 273 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 CCDC28AQ8IWP9 274 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 TIGD4Q8IY51 512 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SAMD12Q8N8I0 201 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 NUP43Q8NFH3 380 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR7G2Q8NG99 324 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR11H7Q8NGC8 314 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SFXN5Q8TD22 340 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ATOH1Q92858 354 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 COL26A1Q96A83 441 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RFT1Q96AA3 541 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PHF21AQ96BD5 680 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 NACC2Q96BF6 587 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ANKRD9Q96BM1 317 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 AHCYL2Q96HN2 611 aaKnown RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SAMD8Q96LT4 415 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ABHD1Q96SE0 405 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 TEX12Q9BXU0 123 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 KCNN2Q9H2S1 579 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ANKRD19PQ9H560 264 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 MED20Q9H944 212 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 FOLH1BQ9HBA9 442 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ENAMQ9NRM1 1142 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 NUDT15Q9NV35 164 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SOHLH2Q9NX45 425 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 BABAM2Q9NXR7 383 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 H2AFY2Q9P0M6 372 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 HCN3Q9P1Z3 774 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 B3GALT2O43825 422 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 CDC123O75794 336 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 CT62P0C5K7 136 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ZGLP1P0C6A0 271 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 FUT1P19526 365 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PITPNBP48739 271 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PDX1P52945 283 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RGS8P57771 180 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 BTG1P62324 171 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 BTG2P78543 158 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 CCL7P80098 99 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PRR5P85299 388 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 TRMT12Q53H54 448 aaKnown RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PRAMEF8Q5VWM4 474 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PRAMEF7Q5VXH5 474 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SLC23A3Q6PIS1 610 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PLEKHM3Q6ZWE6 761 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 MBOAT2Q6ZWT7 520 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ABHD13Q7L211 337 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 CXXC5Q7LFL8 322 aaKnown RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 KRT74Q7RTS7 529 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GPR135Q8IZ08 494 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GHDCQ8N2G8 530 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF655Q8N720 491 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR8H1Q8NGG4 311 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR56A1Q8NGH5 318 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 OR1L3Q8NH93 324 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ELP4Q96EB1 424 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 SLC41A3Q96GZ6 507 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 MCHR1Q99705 422 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ALG8Q9BVK2 526 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 JAM3Q9BX67 310 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 HCAR1Q9BXC0 346 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ENKD1Q9H0I2 346 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ARRDC1-AS1Q9H2J1 176 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 UBQLN3Q9H347 655 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PIGUQ9H490 435 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ZFP64Q9NPA5 681 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RXFP3Q9NSD7 469 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PHF11Q9UIL8 331 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 GMEB2Q9UKD1 530 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 RASD1Q9Y272 281 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 COL27A1Q8IZC6 1860 aaPredicted RBP7.91□□□□□ -1.14
TRIM55-204ENST00000353317 PCNX2A6NKB5 2137 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 ASPMQ8IZT6 3477 aa7.91□□□□□ -1.14
TRIM55-204ENST00000353317 KNTC1P50748 2209 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 E9PI62 339 aa7.9□□□□□ -1.14
TRIM55-204ENST00000353317 EEF1E1O43324 174 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms