RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PTGFRP43088 359 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 P2RX1P51575 399 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RBM39Q14498 530 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 SMAD2Q15796 467 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 HENMT1Q5T8I9 393 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 HSD11B1LQ7Z5J1 315 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GJD3Q8N144 294 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ARL14EPQ8N8R7 260 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RASGEF1AQ8N9B8 481 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 OR6S1Q8NH40 331 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 DVL3Q92997 716 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 VRK1Q99986 396 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 SLC38A1Q9H2H9 487 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 PIGMQ9H3S5 423 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 HCSTQ9UBK5 93 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF629Q9UEG4 869 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 MIOXQ9UGB7 285 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LRFN2Q9ULH4 789 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CLEC4EQ9ULY5 219 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LHX6Q9UPM6 363 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 PLEKHA6Q9Y2H5 1048 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 PQLC2LA1A4F0 135 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 SULT1C2O00338 296 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ADAM12O43184 909 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 OR1F1O43749 312 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RPP14O95059 124 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CSN2P05814 226 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 SBK2P0C263 348 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 MGMTP16455 207 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CDK2P24941 298 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 BDKRB2P30411 391 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CALCRP30988 508 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CSF2RBP32927 897 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CD70P32970 193 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 PSMD4P55036 377 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 TMEM115Q12893 351 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LMAN2Q12907 356 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 FZD5Q13467 585 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RTP2Q5QGT7 225 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ELFN2Q5R3F8 820 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 KHDRBS2Q5VWX1 349 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 FRRS1Q6ZNA5 592 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GDF7Q7Z4P5 450 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 C17orf64Q86WR6 236 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GTPBP8Q8N3Z3 284 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CAMKVQ8NCB2 501 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CHST14Q8NCH0 376 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 FBXO22Q8NEZ5 403 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 OR9A1PQ8NGU1 263 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RXFP4Q8TDU9 374 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GLYATL2Q8WU03 294 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LCORQ96JN0 433 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GLIPR2Q9H4G4 154 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ZFP57Q9NU63 452 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 TAC3Q9UHF0 121 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF230Q9UIE0 474 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 ICKQ9UPZ9 632 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 IGLV3-16A0A075B6K0 115 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 LOC100509620A0A075B734 347 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 H7BY64 318 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 SLC25A12O75746 678 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 C1orf105O95561 183 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 IL5P05113 134 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 NFYBP25208 207 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 GRPRP30550 384 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CRMP1Q14194 572 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CLLU1OSQ5K130 101 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 CORO6Q6QEF8 472 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 Q6ZVU0 165 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 NDUFAF7Q7L592 441 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 FAM122BQ7Z309 247 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 OR51S1Q8NGJ8 323 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 STK35Q8TDR2 534 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 PRAP1Q96NZ9 151 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 TCF7L1Q9HCS4 588 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 MRPS30Q9NP92 439 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 NRIP3Q9NQ35 241 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 RASL12Q9NYN1 266 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 DPP7Q9UHL4 492 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 KCNK7Q9Y2U2 307 aa7.06□□□□□ -1.28
BRCA1-201ENST00000352993 NOP16Q9Y3C1 178 aaKnown RBP7.06□□□□□ -1.28
BRCA1-201ENST00000352993 TRAV27A0A087WT01 109 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SYT5O00445 386 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 CCSO14618 274 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 PPM1DO15297 605 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SNAPINO95295 136 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ASGR2P07307 311 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 GP1BAP07359 652 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SRMP19623 302 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ITGB8P26012 769 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ITPKBP27987 946 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 DLSTP36957 453 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SNTB1Q13884 538 aaKnown RBP7.05□□□□□ -1.28
BRCA1-201ENST00000352993 ODF4Q2M2E3 257 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 TXNDC8Q6A555 127 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 SSX6Q7RTT6 188 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 LRRTM1Q86UE6 522 aa7.05□□□□□ -1.28
BRCA1-201ENST00000352993 NUDT13Q86X67 352 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms