RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RABEPKQ7Z6M1 372 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 GPALPP1Q8IXQ4 340 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ARIH2OSQ8N7S6 290 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 CYB561A3Q8NBI2 242 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 FAM98AQ8NCA5 519 aaKnown RBP15.28■□□□□ 0.04
SAMM50-201ENST00000350028 OR1N1Q8NGS0 311 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 LIPHQ8WWY8 451 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ADOQ96SZ5 270 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 VN1R1Q9GZP7 353 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 RERGLQ9H628 205 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ISG20L2Q9H9L3 353 aaKnown RBP15.28■□□□□ 0.04
SAMM50-201ENST00000350028 C12orf10Q9HB07 376 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 MKL2Q9ULH7 1088 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 POLHQ9Y253 713 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ADAMTS20P59510 1910 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 IGKV1D-42A0A075B6H8 117 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 A0A1W2PQD3 144 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TSPAN2O60636 221 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 MT-ND5P03915 603 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 ANKRD34CP0C6C1 535 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 GTF2E2P29084 291 aaKnown RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 IL12BP29460 328 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 RPL4P36578 427 aaKnown RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 LGALS3BPQ08380 585 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 CDC20Q12834 499 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 KRR1Q13601 381 aaKnown RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 LCN1P1Q5VSP4 162 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 STEAP3Q658P3 488 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 RHBDD2Q6NTF9 364 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 WDR5BQ86VZ2 330 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 MARCH9Q86YJ5 346 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 C9orf40Q8IXQ3 194 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 LRRC17Q8N6Y2 441 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 SMPDL3BQ92485 455 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 AP3S1Q92572 193 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TIMP4Q99727 224 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TMED9Q9BVK6 235 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 SLC7A5P2Q9GIP4 190 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TGIF2Q9GZN2 237 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 WWTR1Q9GZV5 400 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TRIM36Q9NQ86 728 aa15.27■□□□□ 0.04
SAMM50-201ENST00000350028 PLEKHB1Q9UF11 243 aaPredicted RBP15.27■□□□□ 0.04
SAMM50-201ENST00000350028 TECTAO75443 2155 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 MCIDASD6RGH6 385 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 GABRPO00591 440 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 LRRTM2O43300 516 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 RNF13O43567 381 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 HNRNPCP07910 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 HIST1H1CP16403 213 aaKnown RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CCR4P51679 360 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 NR0B1P51843 470 aaKnown RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 TAS2R43P59537 309 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 RPS4XP62701 263 aaKnown RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 DNASE1L3Q13609 305 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 PMS2CLQ68D20 193 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 NUP54Q7Z3B4 507 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 PRSS58Q8IYP2 241 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 PRR22Q8IZ63 422 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 OR4K13Q8NH42 304 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 ASB15Q8WXK1 588 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 GPX7Q96SL4 187 aaPredicted RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 TBX5Q99593 518 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 KATNB1Q9BVA0 655 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 NRIP3Q9NQ35 241 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 HEATR5AQ86XA9 2040 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 UNC13CQ8NB66 2214 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CPED1A4D0V7 1026 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 LRRN3E7EW58 273 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 EIF4E2O60573 245 aaKnown RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 ICOSLGO75144 302 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 PDGFBP01127 241 aaPredicted RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CLUP10909 449 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 PNLIPRP2P54317 469 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 DEFA1P59665 94 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 DEFA3P59666 94 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 ZXDAP98168 799 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 TRAM1Q15629 374 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CBLN3Q6UW01 205 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 ZNF574Q6ZN55 896 aaPredicted RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 POC5Q8NA72 575 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 C17orf47Q8NEP4 570 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 HDHD5Q9BXW7 423 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 LRRN3Q9H3W5 708 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CPNE5Q9HCH3 593 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 ATXN7L1Q9ULK2 861 aaPredicted RBP15.26■□□□□ 0.03
SAMM50-201ENST00000350028 SLC6A5Q9Y345 797 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 NOX1Q9Y5S8 564 aa15.26■□□□□ 0.03
SAMM50-201ENST00000350028 CASKO14936 926 aa15.25■□□□□ 0.03
SAMM50-201ENST00000350028 RGS9O75916 674 aaPredicted RBP15.25■□□□□ 0.03
SAMM50-201ENST00000350028 MRPL3P09001 348 aaKnown RBP15.25■□□□□ 0.03
SAMM50-201ENST00000350028 ZNF85Q03923 595 aa15.25■□□□□ 0.03
SAMM50-201ENST00000350028 PLCXD2Q0VAA5 305 aa15.25■□□□□ 0.03
SAMM50-201ENST00000350028 GGTLC2Q14390 218 aa15.25■□□□□ 0.03
SAMM50-201ENST00000350028 ZNF74Q16587 644 aa15.25■□□□□ 0.03
SAMM50-201ENST00000350028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.03
SAMM50-201ENST00000350028 SLC35D3Q5M8T2 416 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms