RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GPR17Q13304 367 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 HPSE2Q8WWQ2 592 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 PBX4Q9BYU1 374 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CHRDQ9H2X0 955 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 IGSF5Q9NSI5 407 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 HIF1ANQ9NWT6 349 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 STEAP1Q9UHE8 339 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 RNF24Q9Y225 148 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 KCTD3Q9Y597 815 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 ATP1B3P54709 279 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CNTN4Q8IWV2 1026 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 YIPF5Q969M3 257 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 WDR92Q96MX6 357 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 DPH7Q9BTV6 452 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 CHRDL1Q9BU40 450 aa18.17■□□□□ 0.5
HDAC4-201ENST00000345617 MTNR1BP49286 362 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 GLYR1Q49A26 553 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-201ENST00000345617 FAM213BQ8TBF2 198 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 SLC39A9Q9NUM3 307 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 LEFTY1O75610 366 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 TNK1Q13470 666 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 RGMBQ6NW40 437 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 PKMYT1Q99640 499 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 DHRS4Q9BTZ2 278 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 CAMK2AQ9UQM7 478 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 ISCA2Q86U28 154 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 KLK6Q92876 244 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 LOC105369274A0A096LPK9 316 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 NFATC4Q14934 902 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-201ENST00000345617 TECPR1Q7Z6L1 1165 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 OR4N4Q8N0Y3 316 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 KCNG3Q8TAE7 436 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 NRG4Q8WWG1 115 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 IRF7Q92985 503 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 KLHDC7BQ96G42 594 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 SORT1Q99523 831 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 PTPRZ1P23471 2315 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-201ENST00000345617 SCN5AQ14524 2016 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 CEP250Q9BV73 2442 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 DCDC2BA2VCK2 349 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 POM121CA8CG34 1229 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 OR14L1PQ8NHC6 308 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 MSLNLQ96KJ4 702 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 IGHG1P01857 330 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 ID2Q02363 134 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 LYRM7Q5U5X0 104 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 STEAP3Q658P3 488 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.16■□□□□ 0.5
HDAC4-201ENST00000345617 NTN4Q9HB63 628 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 NIT2Q9NQR4 276 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 CFIP05156 583 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 PAN3Q58A45 887 aaKnown RBP18.16■□□□□ 0.5
HDAC4-201ENST00000345617 DTX3Q8N9I9 347 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 NTMT1Q9BV86 223 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 TMEM98Q9Y2Y6 226 aa18.16■□□□□ 0.5
HDAC4-201ENST00000345617 MBP02144 154 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 ITGB2P05107 769 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 HPNP05981 417 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 C14orf80Q86SX3 495 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CRB3Q9BUF7 120 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 OR2F2O95006 317 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 GATMP50440 423 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 P2RX1P51575 399 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 OR2F1Q13607 317 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 ALKAL2Q6UX46 152 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 ZNF582Q96NG8 517 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-201ENST00000345617 GRM7Q14831 915 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 BPIFB2Q8N4F0 458 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 GGHQ92820 318 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 BPIFA2Q96DR5 249 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 FAM122AQ96E09 287 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 ZNF251Q9BRH9 671 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 DPH1Q9BZG8 443 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 YARS2Q9Y2Z4 477 aaKnown RBP18.15■□□□□ 0.5
HDAC4-201ENST00000345617 HIDE1A8MVS5 230 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 METTL15A6NJ78 407 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 FBXO24O75426 580 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 LBHQ53QV2 105 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-201ENST00000345617 SEC14L6B5MCN3 397 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A6P0DMU7 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A5P0DMU8 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A7P0DMV0 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A8P0DMV1 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A9P0DMV2 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 PTPRCAPQ14761 206 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 EBPQ15125 230 aaKnown RBP18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A2Q5DJT8 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A1Q5HYN5 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CT45A3Q8NHU0 189 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 CDS1Q92903 461 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 NENFQ9UMX5 172 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 A0A0U1RQF3 1178 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
HDAC4-201ENST00000345617 FOCADQ5VW36 1801 aa18.14■□□□□ 0.5
HDAC4-201ENST00000345617 NSA2O95478 260 aaKnown RBP18.14■□□□□ 0.5
HDAC4-201ENST00000345617 GPLD1P80108 840 aa18.14■□□□□ 0.5
HDAC4-201ENST00000345617 INPP5KQ9BT40 448 aa18.14■□□□□ 0.5
HDAC4-201ENST00000345617 CLMPQ9H6B4 373 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms