RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SPINT1O43278 529 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 RLN2P04090 185 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 CALCBP10092 127 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF35P13682 527 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 F3P13726 295 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 DCTDP32321 178 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 EEF1A1P68104 462 aaKnown RBP8.92□□□□□ -0.98
HOXA1-201ENST00000343060 CRMP1Q14194 572 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 GGTLC2Q14390 218 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 C2orf68Q2NKX9 166 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 PWWP2BQ6NUJ5 590 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 RPL22L1Q6P5R6 122 aaKnown RBP8.92□□□□□ -0.98
HOXA1-201ENST00000343060 MOB3CQ70IA8 216 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 RFLNBQ8N5W9 214 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 NUP43Q8NFH3 380 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 IGSF21Q96ID5 467 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 LRIG1Q96JA1 1093 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 MRGPRX3Q96LB0 322 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 ACTRT3Q9BYD9 372 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 FXYD6Q9H0Q3 95 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 OR51V1Q9H2C8 321 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 CLDND1Q9NY35 253 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 COA4Q9NYJ1 87 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 PLCL2Q9UPR0 1127 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 HEATR5BQ9P2D3 2071 aa8.92□□□□□ -0.98
HOXA1-201ENST00000343060 MYOFQ9NZM1 2061 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 A0A0G2JN53 185 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 A0A1W2PPK0 400 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 A0A1W2PR48 441 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PQLC2LA1A4F0 135 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TEX46H3BTG2 121 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 H7BY64 318 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SIX6O95475 246 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 AIFM1O95831 613 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 IGF2P01344 180 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 THBS1P07996 1170 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CLTBP09497 229 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CLUP10909 449 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 MGMTP16455 207 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 FUT1P19526 365 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CSNK2A2P19784 350 aaPredicted RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PSMB5P28074 263 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 HTR2AP28223 471 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 NDUFS1P28331 727 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 MC3RP41968 323 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 GMFBP60983 142 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SIRPAP78324 504 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CSNK1G2P78368 415 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CBFBQ13951 182 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 RBMS2Q15434 407 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ZIC1Q15915 447 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF750Q32MQ0 723 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TP53I3Q53FA7 332 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 C9orf131Q5VYM1 1079 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SLC48A1Q6P1K1 146 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 LRRTM4Q86VH4 590 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TMEM17Q86X19 198 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 CCDC116Q8IYX3 515 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SLC43A2Q8N370 569 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 C7orf57Q8NEG2 295 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR52B4Q8NGK2 314 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PFN4Q8NHR9 129 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TMEM239Q8WW34 195 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SLC35A4Q96G79 324 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PAWRQ96IZ0 340 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PRAP1Q96NZ9 151 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 RSPH9Q9H1X1 276 aaPredicted RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 C20orf141Q9NUB4 165 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 IL36AQ9UHA7 158 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 GLOD5A6NK44 160 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 C4orf51C9J302 202 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 K7ESM1 405 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR1F1O43749 312 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 LCMT2O60294 686 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 FCMRO60667 390 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ADAM11O75078 769 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ERAL1O75616 437 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 KDM4BO94953 1096 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SOD2P04179 222 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR2T7P0C7T2 308 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF3P17036 446 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SRMP19623 302 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 RPS4Y1P22090 263 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 GABRR2P28476 465 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 MELKQ14680 651 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 SLC9A5Q14940 896 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 TMEM69Q5SWH9 247 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 FAAP20Q6NZ36 180 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 PARS2Q7L3T8 475 aaKnown RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 FCRLAQ7L513 359 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 POMGNT2Q8NAT1 580 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR2T27Q8NH04 317 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR5K2Q8NHB8 316 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 ZNF681Q96N22 645 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 LRFN5Q96NI6 719 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 GINS4Q9BRT9 223 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 MTHFD2LQ9H903 347 aaPredicted RBP8.91□□□□□ -0.98
HOXA1-201ENST00000343060 NOX4Q9NPH5 578 aa8.91□□□□□ -0.98
HOXA1-201ENST00000343060 OR5V1Q9UGF6 321 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms