RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF350Q9GZX5 532 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SCP2D1Q9UJQ7 156 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A1B0GWA3 101 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SELENOFO60613 162 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PEX14O75381 377 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SCGB1D2O95969 90 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF806P0C7X5 589 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 FPR3P25089 353 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TRHRP34981 398 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PBX2P40425 430 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 IFITM2Q01629 132 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 IRF3Q14653 427 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 MFSD12Q6NUT3 480 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF620Q6ZNG0 422 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RDH10Q8IZV5 341 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OR56B4Q8NH76 319 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RASD2Q96D21 266 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OR2M2Q96R28 347 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 GPA33Q99795 319 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PRSS16Q9NQE7 514 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PLEKHB1Q9UF11 243 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TRIOBPQ9H2D6 2365 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF638Q14966 1978 aaKnown RBP11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A1B0GV50 99 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 SBK2P0C263 348 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 GRM7Q14831 915 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 FAM78AQ5JUQ0 283 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 METRNLQ641Q3 311 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF836Q6ZNA1 936 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 USP53Q70EK8 1073 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 DPY19L4Q7Z388 723 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 OR8D4Q8NGM9 314 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 GAL3ST3Q96A11 431 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 POLHQ9Y253 713 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 V9GYH0 126 aa11.52□□□□□ -0.56
SNRNP48-201ENST00000342415 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 LALBAP00709 142 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 NPR2P20594 1047 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 PRSS3P35030 304 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC6A9P48067 706 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 MTNR1BP49286 362 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR143P51810 404 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 NUP54Q7Z3B4 507 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 CCL4L1Q8NHW4 92 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 BRIX1Q8TDN6 353 aaKnown RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 JSRP1Q96MG2 331 aaPredicted RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ADOQ96SZ5 270 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ATF6BQ99941 703 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 OR52A5Q9H2C5 316 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 CHMP1AQ9HD42 196 aaPredicted RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ACOXLQ9NUZ1 547 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 H0YGG7 62 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 MAN2B1O00754 1011 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 SOD1P00441 154 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 RBMS1P29558 406 aaKnown RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 PRKXP51817 358 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 P2RX3P56373 397 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ARF3P61204 181 aaPredicted RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 SORDQ00796 357 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ARHGAP40Q5TG30 622 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 LHX8Q68G74 356 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 TMEM106AQ96A25 262 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 ACTR10Q9NZ32 417 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 COPS7AQ9UBW8 275 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 DHDHQ9UQ10 334 aa11.52□□□□□ -0.57
SNRNP48-201ENST00000342415 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 A0A1W2PPL8 197 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 PRAMEF25A6NGN4 478 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 RHPN2P1A8MT19 583 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 H7C2Y5 167 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 PLA2G10O15496 165 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 ADH1BP00325 375 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 GABRB1P18505 474 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 HTR4Q13639 388 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 OR7E24Q6IFN5 339 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF547Q8IVP9 402 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 OR52I2Q8NH67 350 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 TGM7Q96PF1 710 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 LIN7BQ9HAP6 207 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 AGPAT2O15120 278 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 TNFP01375 233 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 PRH1P02810 166 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 S1PR1P21453 382 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms