RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 E9PI62 339 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF264O43296 627 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ARHGEF9O43307 516 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 FCER2P06734 321 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 CD40LGP29965 261 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 INPP1P49441 399 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 SLC37A1P57057 533 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 FABP5Q01469 135 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 RAB40BQ12829 278 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 NR0B2Q15466 257 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 NKAIN1Q4KMZ8 207 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF687Q8N1G0 1237 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 S100ZQ8WXG8 99 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 GAL3ST1Q99999 423 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 GPR27Q9NS67 375 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 LANCL2Q9NS86 450 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ASB6Q9NWX5 421 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 ETAA1Q9NY74 926 aa9.32□□□□□ -0.92
RBFOX1-202ENST00000340209 A0A1W2PQM1 296 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 OR6A2O95222 327 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 WISP1O95388 367 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 EPHA8P29322 1005 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 GARNL3Q5VVW2 1013 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 TMPRSS11AQ6ZMR5 421 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 DCDC5Q6ZRR9 648 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 C9orf40Q8IXQ3 194 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 C1orf216Q8TAB5 229 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 KTI12Q96EK9 354 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 COX4I2Q96KJ9 171 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 SIGLEC11Q96RL6 698 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 C14orf105Q9NVL8 296 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 TP53BP1Q12888 1972 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 AKAP8O43823 692 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 HYAL4Q2M3T9 481 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 MTFR2Q6P444 385 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 NIPAL3Q6P499 406 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 PAPD4Q6PIY7 484 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF574Q6ZN55 896 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 PARP16Q8N5Y8 322 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 IFI44Q8TCB0 444 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 GFM1Q96RP9 751 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 NKX3-1Q99801 234 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 FKBP14Q9NWM8 211 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 OSGIN1Q9UJX0 560 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 TMEM5Q9Y2B1 443 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 CUL9Q8IWT3 2517 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 NDUFB2O95178 105 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 CCL4P13236 92 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 SOX2P48431 317 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 RORCP51449 518 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ARMC4Q5T2S8 1044 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ZCCHC12Q6PEW1 402 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ATCAYQ86WG3 371 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF615Q8N8J6 731 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 C3orf49Q96BT1 292 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 RPH3AQ9Y2J0 694 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 EXOSC1Q9Y3B2 195 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 A0A1W2PQL4 384 aaPredicted RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 H0YIG0 161 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 RNF13O43567 381 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 SSX4O60224 188 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 TBXA2RP21731 343 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 EIF1AXP47813 144 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 EMP2P54851 167 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 E2F1Q01094 437 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 RHAGQ02094 409 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF117Q03924 483 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 SQSTM1Q13501 440 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 FGFBP1Q14512 234 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 IRF3Q14653 427 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 MELKQ14680 651 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 POGLUT1Q8NBL1 392 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 LSM14AQ8ND56 463 aaKnown RBP9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 C5orf34Q96MH7 638 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 TEAD3Q99594 435 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 MCCC2Q9HCC0 563 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 SACM1LQ9NTJ5 587 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 MED11Q9P086 117 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 PCDHGA3Q9Y5H0 932 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 CLDN16Q9Y5I7 305 aa9.31□□□□□ -0.92
RBFOX1-202ENST00000340209 PCNX3Q9H6A9 2034 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 CELA2AP08217 269 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 PSMD4P55036 377 aaKnown RBP9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 MLLT11Q13015 90 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 INPP5JQ15735 1006 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 BTBD16Q32M84 506 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF613Q6PF04 617 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 SSX6Q7RTT6 188 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 PTP4A1Q93096 173 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 MMP27Q9H306 513 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 AKIP1Q9NQ31 210 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 A8MV72 311 aaPredicted RBP9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 DRD5P21918 477 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 ABCD3P28288 659 aa9.3□□□□□ -0.92
RBFOX1-202ENST00000340209 TNFSF8P32971 234 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms