RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NCALDP61601 193 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 FCRLAQ7L513 359 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ATG4DQ86TL0 474 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 RNF128Q8TEB7 428 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ABHD3Q8WU67 409 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 STARD4Q96DR4 205 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ZNF559Q9BR84 538 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ALG2Q9H553 416 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 JKAMPQ9P055 326 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ABCD2Q9UBJ2 740 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 RPS6KB2Q9UBS0 482 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 TESQ9UGI8 421 aaKnown RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 PACSIN3Q9UKS6 424 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 HDGFL3Q9Y3E1 203 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 SMAD9O15198 467 aaKnown RBP13.62□□□□□ -0.23
UBE3B-201ENST00000340074 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE3B-201ENST00000340074 PMS2P2O95744 297 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 GSK3BP49841 420 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 NRF1Q16656 503 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-201ENST00000340074 EEF1A1P5Q5VTE0 462 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 GTF2IRD2BQ6EKJ0 949 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 BTLAQ7Z6A9 289 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 GTF2IRD2Q86UP8 949 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-201ENST00000340074 RASSF5Q8WWW0 418 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 GMPPAQ96IJ6 420 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-201ENST00000340074 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 ENKD1Q9H0I2 346 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 PIGMQ9H3S5 423 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 TMEM181Q9P2C4 612 aa13.62□□□□□ -0.23
UBE3B-201ENST00000340074 A0A1B0GWA3 101 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 NDUFAB1O14561 156 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 SS18L1O75177 396 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 PRKD3O94806 890 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 IMPDH2P12268 514 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 UQCRC1P31930 480 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 KDELR2P33947 212 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 OR2B6P58173 313 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 KRT72Q14CN4 511 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 RNPS1Q15287 305 aaKnown RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 OR1Q1Q15612 314 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 NPTX1Q15818 432 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 FBXL19-AS1Q494R0 122 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 ALG10BQ5I7T1 473 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 RANBP3LQ86VV4 465 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 RBM45Q8IUH3 476 aaKnown RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 MCEMP1Q8IX19 187 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 OR6T1Q8NGN1 323 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 BCAS4Q8TDM0 211 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 KCTD14Q9BQ13 255 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-201ENST00000340074 EVA1AQ9H8M9 152 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 GLRX2Q9NS18 164 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
UBE3B-201ENST00000340074 ELOA3DA6NLF2 546 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-201ENST00000340074 A8MVM7 634 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 A8MXE2 369 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 TMEM229AB2RXF0 380 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 IFNA14P01570 189 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 IGFBP2P18065 325 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 AGTR1P30556 359 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 CTBP2P56545 445 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 SNTB1Q13884 538 aaKnown RBP13.6□□□□□ -0.23
UBE3B-201ENST00000340074 ELOA3BQ3SY89 546 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 MEX3BQ6ZN04 569 aaKnown RBP13.6□□□□□ -0.23
UBE3B-201ENST00000340074 TUSC5Q8IXB3 177 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 SLC43A2Q8N370 569 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 ELOA3Q8NG57 546 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 PROX1Q92786 737 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 RNASE6Q93091 150 aaKnown RBP13.6□□□□□ -0.23
UBE3B-201ENST00000340074 LRRC46Q96FV0 321 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 MCHR1Q99705 422 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 POTEKPQ9BYX7 375 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 OPN3Q9H1Y3 402 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-201ENST00000340074 C12orf10Q9HB07 376 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 TMEM27Q9HBJ8 222 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 SH3GLB1Q9Y371 365 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 EMC9Q9Y3B6 208 aa13.6□□□□□ -0.23
UBE3B-201ENST00000340074 A0A0B4J2E0 115 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 A0A1B0GX12 115 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 CXCR6O00574 342 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 MSTNO14793 375 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 GSTA4O15217 222 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 HNRNPRO43390 633 aaKnown RBP13.59□□□□□ -0.23
UBE3B-201ENST00000340074 DNPH1O43598 174 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 CYTIPO60759 359 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 CGAP01215 116 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 COX6B1P14854 86 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms