RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 CORO2BQ9UQ03 480 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 HDGFL3Q9Y3E1 203 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 ABCA4P78363 2273 aa13.57□□□□□ -0.24
PRKN-201ENST00000338468 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 AKAP6Q13023 2319 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 A0A1W2PPR1 153 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 C16orf97H3BN30 126 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 FXYD1O00168 92 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 SIAH2O43255 324 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 RAMP1O60894 148 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 FKBP2P26885 142 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 DNAJA1P31689 397 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 KCNJ5P48544 419 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 GZMMP51124 257 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 PCBP3P57721 371 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 CSNK2A1P68400 391 aaPredicted RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 H3F3AP84243 136 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 RASGEF1BQ0VAM2 473 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 GLIPR1L2Q4G1C9 344 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 WBP2NLQ6ICG8 309 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 DHRS4L2Q6PKH6 230 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 TFAP2EQ6VUC0 442 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 STAC2Q6ZMT1 411 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 NET1Q7Z628 596 aaPredicted RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 SLC35B4Q969S0 331 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 POLDIP3Q9BY77 421 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 CLEC4MQ9H2X3 399 aaPredicted RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 KAT8Q9H7Z6 458 aaKnown RBP13.56□□□□□ -0.24
PRKN-201ENST00000338468 KLHL28Q9NXS3 571 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 TRAPPC4Q9Y296 219 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
PRKN-201ENST00000338468 IGKV3D-15A0A087WSY6 115 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 ZNF716A6NP11 495 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 DNPH1O43598 174 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 HRGP04196 525 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 UQCRBP14927 111 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 AQP1P29972 269 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 BNIP2Q12982 314 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 TMEM201Q5SNT2 666 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 ANKRD34AQ69YU3 496 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 TGIF2LYQ8IUE0 185 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 GABRG1Q8N1C3 465 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 CADM2Q8N3J6 435 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 ZNF775Q96BV0 537 aaPredicted RBP13.55□□□□□ -0.24
PRKN-201ENST00000338468 FOXC2Q99958 501 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 WFDC6Q9BQY6 131 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 KLHL4Q9C0H6 718 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 LIME1Q9H400 295 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 TMEM181Q9P2C4 612 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 KLHL9Q9P2J3 617 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 NDRG3Q9UGV2 375 aa13.55□□□□□ -0.24
PRKN-201ENST00000338468 ZNF724A8MTY0 619 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 DEFB108AA8MXU0 73 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 TMEM229AB2RXF0 380 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 MFN2O95140 757 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 THBDP07204 575 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 SLC6A2P23975 617 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 HTR2AP28223 471 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 NTF4P34130 210 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 MAP2K6P52564 334 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 IST1P53990 364 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 OR2B6P58173 313 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 DMTNQ08495 405 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 PDK3Q15120 406 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 TRMT5Q32P41 509 aaKnown RBP13.54□□□□□ -0.24
PRKN-201ENST00000338468 REP15Q6BDI9 236 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 NANOGP8Q6NSW7 305 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 ATG4DQ86TL0 474 aaPredicted RBP13.54□□□□□ -0.24
PRKN-201ENST00000338468 SNX32Q86XE0 403 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 KRT73Q86Y46 540 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 CCDC103Q8IW40 242 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 DDIT4LQ96D03 193 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 TACO1Q9BSH4 297 aaKnown RBP13.54□□□□□ -0.24
PRKN-201ENST00000338468 PRR14Q9BWN1 585 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 POTEKPQ9BYX7 375 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 CXXC4Q9H2H0 198 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 ARMC7Q9H6L4 198 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 NANOGQ9H9S0 305 aa13.54□□□□□ -0.24
PRKN-201ENST00000338468 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
PRKN-201ENST00000338468 TPST2O60704 377 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 NPIPB7O75200 414 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
PRKN-201ENST00000338468 FPR1P21462 350 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 CRYGSP22914 178 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 CXCR1P25024 350 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 OR3A2P47893 321 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 SLC16A1P53985 500 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 COPZ1P61923 177 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 RBBP4Q09028 425 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 POU4F3Q15319 338 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
PRKN-201ENST00000338468 RABL3Q5HYI8 236 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms