RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 DYNC2LI1Q8TCX1 351 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 SLC46A1Q96NT5 459 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 OR1F2PQ96R84 312 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 RBM7Q9Y580 266 aaKnown RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 COL11A1P12107 1806 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 BRWD3Q6RI45 1802 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 PCBP3P57721 371 aaKnown RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ZMYND11Q15326 602 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF578Q96N58 590 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CHST8Q9H2A9 424 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DOCK8Q8NF50 2099 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 NARSO43776 548 aaKnown RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF43P17038 809 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 GFERP55789 205 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CHAF1BQ13112 559 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ARFRP1Q13795 201 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 HES5Q5TA89 166 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 MARCH3Q86UD3 253 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CHPT1Q8WUD6 406 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CACNG6Q9BXT2 260 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 GAREM1Q9H706 876 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DPM1O60762 260 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CSN2P05814 226 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 OR3A3P47888 321 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 OR3A2P47893 321 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CCINQ13939 588 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DDIT4LQ96D03 193 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 LRRC61Q9BV99 259 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 GPATCH2Q9NW75 528 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DKKL1Q9UK85 242 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ATXN7L1Q9ULK2 861 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ACACAQ13085 2346 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 A0A087WV62 115 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 NPIPA2E9PIF3 369 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 NPIPA3F8WFD2 350 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 SEC14L5O43304 696 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 BRINP1O60477 761 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 H2AFB2P0C5Z0 115 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 IDUAP35475 653 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DMWDQ09019 674 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 CBFBQ13951 182 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 GPR139Q6DWJ6 353 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 SLC18B1Q6NT16 456 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF417Q8TAU3 575 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 FCAMRQ8WWV6 532 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 AKAP1Q92667 903 aaKnown RBP eCLIP5.82□□□□□ -1.48
PRKDC-202ENST00000338368 OR2A14Q96R47 310 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 RNF121Q9H920 327 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 SIAEQ9HAT2 523 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 DHDHQ9UQ10 334 aa5.82□□□□□ -1.48
PRKDC-202ENST00000338368 TP53BP1Q12888 1972 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ARRDC5A6NEK1 342 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A8MV72 311 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TRAPPC6AO75865 159 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 KCNK2O95069 426 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PPICP45877 212 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 FZD2Q14332 565 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RAET1LQ5VY80 246 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PAQR6Q6TCH4 344 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF322Q6U7Q0 402 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF620Q6ZNG0 422 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 LRRC69Q6ZNQ3 347 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RCBTB1Q8NDN9 531 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GPR148Q8TDV2 347 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TXNL4BQ9NX01 149 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CNOT1A5YKK6 2376 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CD14P08571 375 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SHC1P29353 583 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM69Q5SWH9 247 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 OR5M10Q6IEU7 315 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CNIH2Q6PI25 160 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PHC2Q8IXK0 858 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MVB12AQ96EY5 273 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HINT3Q9NQE9 182 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MMACHCQ9Y4U1 282 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ZFAND5O76080 213 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 EFEMP2O95967 443 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HOXB3P14651 431 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GZMMP51124 257 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 OPN5Q6U736 354 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ZG16BQ96DA0 208 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CITED4Q96RK1 184 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 IFT46Q9NQC8 304 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 INPP5EQ9NRR6 644 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 EIF3KQ9UBQ5 218 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 AK6Q9Y3D8 172 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A0A1B0GX78 115 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 UTS2O95399 124 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 OPN1LWP04000 364 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SLC6A9P48067 706 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ELAVL1Q15717 326 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 IL22RA1Q8N6P7 574 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SIRT3Q9NTG7 399 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ABRACLQ9P1F3 81 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A0A1W2PQ09 198 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 IL7P13232 177 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MAKP20794 623 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 STOMP27105 288 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MTNR1BP49286 362 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms