RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OC90Q02509 493 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TFF2Q03403 129 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 C11orf88Q6PI97 169 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FCRLAQ7L513 359 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FAM109AQ8N4B1 249 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF527Q8NB42 609 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 CEP76Q8TAP6 659 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 METTL17Q9H7H0 456 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 NOX4Q9NPH5 578 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC17A4Q9Y2C5 497 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 GPR89AB7ZAQ6 455 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TEX46H3BTG2 121 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 GPR89BP0CG08 455 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TFPIP10646 304 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC6A1P30531 599 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 GDNFP39905 211 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ENPP2Q13822 863 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ARHGAP11AQ6P4F7 1023 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF767PQ75MW2 155 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC35F2Q8IXU6 374 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 OR2L13Q8N349 312 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF764Q96H86 408 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 C10orf90Q96M02 699 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 NKX3-1Q99801 234 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ERVMER34-1Q9H9K5 563 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 NANSQ9NR45 359 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 C19orf53Q9UNZ5 99 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 B4DGG1 531 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 SERPINA3P01011 423 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 NPR2P20594 1047 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ADH7P40394 386 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 PITPNAQ00169 270 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 JAZF1Q86VZ6 243 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF485Q8NCK3 441 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 FGF14Q92915 247 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 SPACA7Q96KW9 195 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 ADGRL4Q9HBW9 690 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
HMGCS1-201ENST00000325110 CABIN1Q9Y6J0 2220 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 TDRD6O60522 2096 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 MEIS3P1A6NDR6 274 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 MCIDASD6RGH6 385 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ARPC1BO15143 372 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 FMO6PO60774 539 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 MAS1P04201 325 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 OR8G3PP0DMU2 310 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 POU3F3P20264 500 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 NTSR1P30989 418 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 VEGFCP49767 419 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF85Q03923 595 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 LEG1Q6P5S2 330 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 FAM220AQ7Z4H9 259 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 DNAAF1Q8NEP3 725 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 TOR1AIP2Q8NFQ8 470 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 FGF11Q92914 225 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 GINS4Q9BRT9 223 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF350Q9GZX5 532 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 TMEM138Q9NPI0 162 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC22A7Q9Y694 548 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 URB1O60287 2271 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 TRABD2BA6NFA1 517 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 NDUFB2O95178 105 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 F13BP05160 661 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 P2RX3P56373 397 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ACTC1P68032 377 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ACTA1P68133 377 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 SIRPAP78324 504 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 OR11H7Q8NGC8 314 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 SGTBQ96EQ0 304 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 OR2A5Q96R48 311 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 TSPAN10Q9H1Z9 355 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 POT1Q9NUX5 634 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 SPEF1Q9Y4P9 236 aa11.88□□□□□ -0.51
HMGCS1-201ENST00000325110 ITPKBP27987 946 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TMEM196Q5HYL7 178 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 RPL13AP3Q6NVV1 102 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 MRGPREQ86SM8 312 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TMPRSS12Q86WS5 348 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 PHOSPHO1Q8TCT1 267 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ADAD1Q96M93 576 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 GAL3ST4Q96RP7 486 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 SLITRK2Q9H156 845 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TAS2R10Q9NYW0 307 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ZMIZ1Q9ULJ6 1067 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 CIB4A0PJX0 185 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ELOA3DA6NLF2 546 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TRIM3O75382 744 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 WNT1P04628 370 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 NRG3P56975 720 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ELOA3BQ3SY89 546 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms