RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TAS1R3Q7RTX0 852 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SDR9C7Q8NEX9 313 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CHTF18Q8WVB6 975 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 UBXN10Q96LJ8 280 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ZNF286AQ9HBT8 521 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 OBP2BQ9NPH6 170 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 KLHL13Q9P2N7 655 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 STYXL1Q9Y6J8 313 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ADGRB2O60241 1585 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SRPX2O60687 465 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 F10P00742 488 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 HSD17B1P14061 328 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TAS2R19P59542 299 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SEC61A1P61619 476 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 HTR4Q13639 388 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 UGT3A2Q3SY77 523 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 DNAJC22Q8N4W6 341 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLC6A16Q9GZN6 736 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLCO5A1Q9H2Y9 848 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.41□□□□□ -1.22
CIITA-201ENST00000324288 UNCXA6NJT0 531 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PPP1R2P9O14990 202 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 SLC2A1P11166 492 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 FUT1P19526 365 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LTBQ06643 244 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CLEC12BQ2HXU8 276 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 OR4M1Q8NGD0 313 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 GPR78Q96P69 363 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 POFUT1Q9H488 388 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 AGPAT4Q9NRZ5 378 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 POLR2AP24928 1970 aaKnown RBP7.4□□□□□ -1.22
CIITA-201ENST00000324288 A0A087WZY1 265 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.22
CIITA-201ENST00000324288 KITLGP21583 273 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CD70P32970 193 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 KDELC1Q6UW63 502 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 FAM57BQ71RH2 274 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 COX15Q7KZN9 410 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 MINDY1Q8N5J2 469 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LMNTD1Q8N9Z9 388 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CHST14Q8NCH0 376 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 HERPUD2Q9BSE4 406 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ZNF768Q9H5H4 540 aaKnown RBP7.4□□□□□ -1.22
CIITA-201ENST00000324288 SPHK2Q9NRA0 654 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 COQ4Q9Y3A0 265 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PRAF2O60831 178 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LDB3O75112 727 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 KCNK5O95279 499 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ARSBP15848 533 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 DNAJB1P25685 340 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 FXNQ16595 210 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 FAM69AQ5T7M9 428 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LACC1Q8IV20 430 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CMTM1Q8IZ96 169 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CHCHD4Q8N4Q1 142 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LRRC15Q8TF66 581 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PRRT1Q99946 306 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 GNB4Q9HAV0 340 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 LRP5LA4QPB2 252 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 GCH1P30793 250 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 HHEXQ03014 270 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ZNF704Q6ZNC4 412 aaPredicted RBP7.4□□□□□ -1.22
CIITA-201ENST00000324288 COMMD6Q7Z4G1 85 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 SLC35B4Q969S0 331 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PAAF1Q9BRP4 392 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 CBY1Q9Y3M2 126 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 TMEM14AQ9Y6G1 99 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ARHGAP21Q5T5U3 1957 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PHLPP1O60346 1717 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 OR2B8PP59922 312 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 PHLDA2Q53GA4 152 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ADAM5Q6NVV9 412 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 ZNF845Q96IR2 970 aaPredicted RBP7.4□□□□□ -1.22
CIITA-201ENST00000324288 RNF170Q96K19 258 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 SPATA31D1Q6ZQQ2 1576 aa7.4□□□□□ -1.22
CIITA-201ENST00000324288 SYPP08247 313 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 OR8G3PP0DMU2 310 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 ZNF28P17035 718 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 NAT1P18440 290 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 LAP3P28838 519 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 NTHL1P78549 312 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 ZNF33BQ06732 778 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 GBX1Q14549 363 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 IL34Q6ZMJ4 242 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 MOB3CQ70IA8 216 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 TM9SF4Q92544 642 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 UTP4Q969X6 686 aaKnown RBP7.4□□□□□ -1.23
CIITA-201ENST00000324288 PIAS3Q9Y6X2 628 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 C17orf105B2RV13 164 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 AP1G1O43747 822 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 SEC14L2O76054 403 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 FOLR1P15328 257 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 CSF2RAP15509 400 aa7.4□□□□□ -1.23
CIITA-201ENST00000324288 POLR2IP36954 125 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms