RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 FGF19O95750 216 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 IGFALSP35858 605 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 KCNJ5P48544 419 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ADAM8P78325 824 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 SORDQ00796 357 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ILF3Q12906 894 aaKnown RBP eCLIP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 AGERQ15109 404 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 AANATQ16613 207 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 C3orf38Q5JPI3 329 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ENTPD8Q5MY95 495 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 OR13C2Q8NGS9 318 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 NT5DC2Q9H857 520 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TP53BP1Q12888 1972 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 A0A0A6YYC8 382 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 KANTRA0A1W2PQU2 76 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 I3L1I5 382 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 FOXE1O00358 373 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 LILRB5O75023 590 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 KRT33AO76009 404 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 EGFP01133 1207 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 CTSBP07858 339 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 FXYD6P3P58550 94 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 USP53Q70EK8 1073 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 UBE3DQ7Z6J8 389 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 OR9A4Q8NGU2 314 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 PFN4Q8NHR9 129 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 SUN3Q8TAQ9 357 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
RETREG3-201ENST00000309428 OR2M4Q96R27 311 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 FN3KQ9H479 309 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 FBXL4Q9UKA2 621 aa11.74□□□□□ -0.53
RETREG3-201ENST00000309428 IGKV1-8A0A0C4DH67 115 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 TRHRP34981 398 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 RPS21P63220 83 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 PGGHGQ32M88 737 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 PCGF3Q3KNV8 242 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 LAS2Q8IYD9 372 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ZFP82Q8N141 532 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 MS4A15Q8N5U1 240 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 OR7G2Q8NG99 324 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 OR52B4Q8NGK2 314 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 THAP4Q8WY91 577 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 DVL3Q92997 716 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ABHD1Q96SE0 405 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ATF6BQ99941 703 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 RNF32Q9H0A6 362 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 TRAPPC4Q9Y296 219 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 UNC119BA6NIH7 251 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 EEF1E1-BLOC1S5C9J1V9 151 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SNRPGP62308 76 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 E2F1Q01094 437 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SCRN3Q0VDG4 424 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 GAS6Q14393 721 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SFRP5Q5T4F7 317 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 OR6M1Q8NGM8 313 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 FBXW5Q969U6 566 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 MS4A6EQ96DS6 147 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 NEURL3Q96EH8 262 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 MRPL48Q96GC5 212 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SLC7A5P2Q9GIP4 190 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 KLHL42Q9P2K6 505 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 COLEC10Q9Y6Z7 277 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 TRAV18A0A075B6X5 111 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 RBBP9O75884 186 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 RCBTB2O95199 551 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 CEACAM5P06731 702 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 UBL4AP11441 157 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 CPEP16870 476 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 CRMP1Q14194 572 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 COL28A1Q2UY09 1125 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM196Q5HYL7 178 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 OR5M10Q6IEU7 315 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 JAGN1Q8N5M9 183 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 DUSP19Q8WTR2 217 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SETD7Q8WTS6 366 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 PRRC1Q96M27 445 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 OR2M2Q96R28 347 aa11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF768Q9H5H4 540 aaKnown RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 ELL3Q9HB65 397 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 SIRT3Q9NTG7 399 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 MN1Q10571 1320 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-201ENST00000309428 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PRSS38A1L453 326 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM229AB2RXF0 380 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TBX6O95947 436 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PVALBP20472 110 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PSMA3P25788 255 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 AQP2P41181 271 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms