RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MADDQ8WXG6 1647 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 LOC285095A0A1B0GVY8 99 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 SULT1A3P0DMM9 295 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 SULT1A4P0DMN0 295 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 OR4C11Q6IEV9 310 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 ISYNA1Q9NPH2 558 aa12.59□□□□□ -0.39
TRIM56-201ENST00000306085 AGLP35573 1532 aa12.58□□□□□ -0.39
TRIM56-201ENST00000306085 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.39
TRIM56-201ENST00000306085 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.39
TRIM56-201ENST00000306085 MED30Q96HR3 178 aa12.58□□□□□ -0.39
TRIM56-201ENST00000306085 IER3IP1Q9Y5U9 82 aa12.58□□□□□ -0.39
TRIM56-201ENST00000306085 BTBD17A6NE02 478 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 DPP4P27487 766 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 DMWDQ09019 674 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 TEAD2Q15562 447 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 OR52E8Q6IFG1 317 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SLC2A13Q96QE2 648 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF696Q9H7X3 374 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 GPR160Q9UJ42 338 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 HSD17B6O14756 317 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 GPR39O43194 453 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SOCS5O75159 536 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 FAM57BQ71RH2 274 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 HUS1BQ8NHY5 278 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 YIPF5Q969M3 257 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 F2RL3Q96RI0 385 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 DPH7Q9BTV6 452 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 MARCH4Q9P2E8 410 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 PHOX2AO14813 284 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 TIMM8AO60220 97 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 ACRV1P26436 265 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 LRRC28Q86X40 367 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 BPIFB2Q8N4F0 458 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 B3GNT7Q8NFL0 401 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 TINAGL1Q9GZM7 467 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 G3V3Q6 166 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 OPN1LWP04000 364 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 HTR3AP46098 478 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 TIPARPQ7Z3E1 657 aaKnown RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 POFUT1Q9H488 388 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 CHST11Q9NPF2 352 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 RPA2P15927 270 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 TGFBR3Q03167 851 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 MLF2Q15773 248 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 ENDOVQ8N8Q3 282 aaKnown RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 HOXD1Q9GZZ0 328 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 ENPP5Q9UJA9 477 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 POU3F2P20265 443 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 KCNQ1P51787 676 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 CATR1Q13166 79 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SMAD2Q15796 467 aaKnown RBP12.58□□□□□ -0.4
TRIM56-201ENST00000306085 USP53Q70EK8 1073 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 OR5M8Q8NGP6 311 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 SLC45A3Q96JT2 553 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 V9GY05 133 aa12.58□□□□□ -0.4
TRIM56-201ENST00000306085 GYPBP06028 91 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 DUSP3P51452 185 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CLEC9AQ6UXN8 241 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 NIPA2Q8N8Q9 360 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 TSACCQ96A04 125 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 FAXDC2Q96IV6 333 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 INIPQ9NRY2 104 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 HSPE1-MOB4S4R3N1 261 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 JCADQ9P266 1359 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CHD1O14646 1710 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 MICAQ29983 383 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR2T11Q8NH01 316 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 PIP5KL1Q5T9C9 394 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 C9orf135Q5VTT2 229 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 LYPD4Q6UWN0 246 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SOX7Q9BT81 388 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SIX4Q9UIU6 781 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 GABRQQ9UN88 632 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 GLYR1Q49A26 553 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CATSPERDQ86XM0 798 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR13C2Q8NGS9 318 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CD99L2Q8TCZ2 262 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 DCLRE1CQ96SD1 692 aaKnown RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 A0A1W2PQ09 198 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 EOMESO95936 686 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 RELAQ04206 551 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CYP1B1Q16678 543 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 NDUFAF7Q7L592 441 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms