RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ACAA2P42765 397 aaKnown RBP5□□□□□ -1.61
VPS50-202ENST00000305866 GPR1P46091 355 aa5□□□□□ -1.61
VPS50-202ENST00000305866 SCAND1P57086 179 aa5□□□□□ -1.61
VPS50-202ENST00000305866 VSX2P58304 361 aaPredicted RBP5□□□□□ -1.61
VPS50-202ENST00000305866 TNFRSF17Q02223 184 aa5□□□□□ -1.61
VPS50-202ENST00000305866 CDK5R1Q15078 307 aa5□□□□□ -1.61
VPS50-202ENST00000305866 LTB4RQ15722 352 aa5□□□□□ -1.61
VPS50-202ENST00000305866 RPE65Q16518 533 aa5□□□□□ -1.61
VPS50-202ENST00000305866 TCEAL5Q5H9L2 206 aa5□□□□□ -1.61
VPS50-202ENST00000305866 PRPF38BQ5VTL8 546 aaKnown RBP5□□□□□ -1.61
VPS50-202ENST00000305866 PWWP2BQ6NUJ5 590 aa5□□□□□ -1.61
VPS50-202ENST00000305866 MFSD12Q6NUT3 480 aa5□□□□□ -1.61
VPS50-202ENST00000305866 DEF8Q6ZN54 512 aa5□□□□□ -1.61
VPS50-202ENST00000305866 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
VPS50-202ENST00000305866 VN1R4Q7Z5H5 301 aa5□□□□□ -1.61
VPS50-202ENST00000305866 DEFB128Q7Z7B8 93 aa5□□□□□ -1.61
VPS50-202ENST00000305866 GID4Q8IVV7 300 aa5□□□□□ -1.61
VPS50-202ENST00000305866 TRMT10AQ8TBZ6 339 aaKnown RBP5□□□□□ -1.61
VPS50-202ENST00000305866 ST8SIA4Q92187 359 aa5□□□□□ -1.61
VPS50-202ENST00000305866 RFKQ969G6 155 aa5□□□□□ -1.61
VPS50-202ENST00000305866 ELSPBP1Q96BH3 223 aa5□□□□□ -1.61
VPS50-202ENST00000305866 C1GALT1C1Q96EU7 318 aa5□□□□□ -1.61
VPS50-202ENST00000305866 MS4A4EQ96PG1 132 aa5□□□□□ -1.61
VPS50-202ENST00000305866 GFM1Q96RP9 751 aaKnown RBP5□□□□□ -1.61
VPS50-202ENST00000305866 NPAS1Q99742 590 aa5□□□□□ -1.61
VPS50-202ENST00000305866 ALG8Q9BVK2 526 aa5□□□□□ -1.61
VPS50-202ENST00000305866 LGR4Q9BXB1 951 aa5□□□□□ -1.61
VPS50-202ENST00000305866 MTHFD2LQ9H903 347 aaPredicted RBP5□□□□□ -1.61
VPS50-202ENST00000305866 ADAM30Q9UKF2 790 aa5□□□□□ -1.61
VPS50-202ENST00000305866 SLC9A8Q9Y2E8 581 aa5□□□□□ -1.61
VPS50-202ENST00000305866 FER1L5A0AVI2 2057 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 LOC105369274A0A096LPK9 316 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FEZF1A0PJY2 475 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 LINC01553A4QN01 128 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FAM183AA6NL82 134 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 DUXAA6NLW8 204 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ATP6V1G2-DDX39BF2Z307 99 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 LDLRAD4O15165 306 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 AIFM1O95831 613 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MT-ND4P03905 459 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 HMGN2P05204 90 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 CD3GP09693 182 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SBK2P0C263 348 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TMIGD3P0DMS9 266 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 S1PR1P21453 382 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 GCGRP47871 477 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MANFP55145 182 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 NRG3P56975 720 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 RAB25P57735 213 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR12D2P58182 307 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 RPS15AP62244 130 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 ST3GAL3Q11203 375 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 GAS6Q14393 721 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MST1LQ2TV78 715 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MZT2BQ6NZ67 158 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ZNF613Q6PF04 617 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CPOQ8IVL8 374 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR4N4Q8N0Y3 316 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR6C4Q8NGE1 309 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR5M9Q8NGP3 310 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 OR56B4Q8NH76 319 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SORCS1Q8WY21 1168 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 KAT2AQ92830 837 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 GCDHQ92947 438 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SMIM19Q96E16 107 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CEP19Q96LK0 163 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SERINC2Q96SA4 455 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 DPCDQ9BVM2 203 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SEMA4CQ9C0C4 833 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 PPA2Q9H2U2 334 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 UCK1Q9HA47 277 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MYOZ1Q9NP98 299 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 TM7SF3Q9NS93 570 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TMEM100Q9NV29 134 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 DZANK1Q9NVP4 752 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FBXO34Q9NWN3 711 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 TAS2R5Q9NYW4 299 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 EPHA6Q9UF33 1036 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 APOBEC3BQ9UH17 382 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 KCNG2Q9UJ96 466 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FAM240BA0A1B0GVZ2 78 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CDHR4A6H8M9 788 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 ANKDD1BA6NHY2 528 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FAM74A7A6NL05 159 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 C4orf47A7E2U8 309 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 AIPO00170 330 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 MID1O15344 667 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FGF16O43320 207 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 SNAPC5O75971 98 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 NDUFB6O95139 128 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 GIPP09681 153 aaPredicted RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 SNRPBP14678 240 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 VEGFBP49765 207 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CDH11P55287 796 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 DDX39BQ13838 428 aaKnown RBP4.99□□□□□ -1.61
VPS50-202ENST00000305866 LINC00303Q3SY05 128 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FAM74A3Q4VXF1 159 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 CASP12Q6UXS9 341 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 FAM122BQ7Z309 247 aa4.99□□□□□ -1.61
VPS50-202ENST00000305866 NRROSQ86YC3 692 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms