RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ARL5BQ96KC2 179 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 A4GNTQ9UNA3 340 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 HDGFL3Q9Y3E1 203 aa21.99■■□□□ 1.11
HOXC9-201ENST00000303450 A0A1B0GUH1 482 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 ZC3H12DA2A288 527 aaKnown RBP21.98■■□□□ 1.11
HOXC9-201ENST00000303450 J3KTA2 159 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 CCL21O00585 134 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 CXCL13O43927 109 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 FABP3P05413 133 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 C1orf146Q5VVC0 180 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 RTL6Q6ICC9 239 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 RPTNQ6XPR3 784 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 FJX1Q86VR8 437 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 STK35Q8TDR2 534 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 DNAJA3Q96EY1 480 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 MPP4Q96JB8 637 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 ZNF300Q96RE9 604 aaPredicted RBP21.98■■□□□ 1.11
HOXC9-201ENST00000303450 FNDC11Q9BVV2 318 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 MAGIXQ9H6Y5 334 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 COQ10BQ9H8M1 238 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 NDUFAF4Q9P032 175 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 FAM215AQ9Y5M1 114 aa21.98■■□□□ 1.11
HOXC9-201ENST00000303450 E9PLN8 166 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 SULT2B1O00204 365 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 LRRTM2O43300 516 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 THRBP10828 461 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 RHCEP18577 417 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 CHRNB3Q05901 458 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 ST3GAL3Q11203 375 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 FOXD4Q12950 439 aaPredicted RBP21.97■■□□□ 1.11
HOXC9-201ENST00000303450 MYBPHQ13203 477 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 FAM98BQ52LJ0 330 aaKnown RBP21.97■■□□□ 1.11
HOXC9-201ENST00000303450 PPP4R4Q6NUP7 873 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 MYO7BQ6PIF6 2116 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 TMPPEQ6ZT21 453 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 TSEN54Q7Z6J9 526 aaKnown RBP21.97■■□□□ 1.11
HOXC9-201ENST00000303450 UTP4Q969X6 686 aaKnown RBP21.97■■□□□ 1.11
HOXC9-201ENST00000303450 VKORC1Q9BQB6 163 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 POTEKPQ9BYX7 375 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 CALHM2Q9HA72 323 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 IL1RAPQ9NPH3 570 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 RHCGQ9UBD6 479 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 MEMO1Q9Y316 297 aa21.97■■□□□ 1.11
HOXC9-201ENST00000303450 LYPD3O95274 346 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 DIO1P49895 249 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 CSNK2A1P68400 391 aaPredicted RBP21.96■■□□□ 1.11
HOXC9-201ENST00000303450 C4orf17Q53FE4 359 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 C1orf140Q5VVS0 124 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 NSUN5P2Q63ZY6 315 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 LINC00114Q6XXX2 140 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 ADGRE4PQ86SQ3 457 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 ZDHHC21Q8IVQ6 265 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 HIVEP3Q5T1R4 2406 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 CD8B2A6NJW9 211 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 FFAR1O14842 300 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 SYNGR4O95473 234 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 UMPSP11172 480 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 PTNP21246 168 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 RAC3P60763 192 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 EGR4Q05215 589 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 PON3Q15166 354 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 TMEM211Q6ICI0 200 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 TTC33Q6PID6 262 aaPredicted RBP21.96■■□□□ 1.11
HOXC9-201ENST00000303450 C5orf46Q6UWT4 87 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 WDR88Q6ZMY6 472 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 P3H2Q8IVL5 708 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 OFCC1Q8IZS5 231 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 RPRMLQ8N4K4 120 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 CPNE4Q96A23 557 aaPredicted RBP21.96■■□□□ 1.11
HOXC9-201ENST00000303450 MCTS1Q9ULC4 181 aaKnown RBP21.96■■□□□ 1.11
HOXC9-201ENST00000303450 AURKCQ9UQB9 309 aa21.96■■□□□ 1.11
HOXC9-201ENST00000303450 RELNP78509 3460 aa21.95■■□□□ 1.11
HOXC9-201ENST00000303450 DHRS12A0PJE2 317 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 SLC22A20A6NK97 555 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 KDM4EB2RXH2 506 aaPredicted RBP21.95■■□□□ 1.1
HOXC9-201ENST00000303450 NPIPB7O75200 414 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 DIRAS1O95057 198 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 AHSA1O95433 338 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 PMS2P2O95744 297 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 IDUAP35475 653 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 ERFP50548 548 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 PLXDC2Q6UX71 529 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 P4HA3Q7Z4N8 544 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 NKAIN4Q8IVV8 208 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 RAB3IPQ96QF0 476 aaPredicted RBP21.95■■□□□ 1.1
HOXC9-201ENST00000303450 UCN2Q96RP3 112 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 EPYCQ99645 322 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 PRSS27Q9BQR3 290 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 TTYH2Q9BSA4 534 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 TMEM43Q9BTV4 400 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 SRXN1Q9BYN0 137 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 PRRG4Q9BZD6 226 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 CLCF1Q9UBD9 225 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 TRAPPC4Q9Y296 219 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 ZNF175Q9Y473 711 aa21.95■■□□□ 1.1
HOXC9-201ENST00000303450 PHF3Q92576 2039 aaKnown RBP21.94■■□□□ 1.1
HOXC9-201ENST00000303450 MYO18BQ8IUG5 2567 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 ARHGAP21Q5T5U3 1957 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 IGKV1D-42A0A075B6H8 117 aa21.94■■□□□ 1.1
HOXC9-201ENST00000303450 GPIP06744 558 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms