RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ELP2Q6IA86 826 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 TMEM64Q6YI46 380 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 DNAAF1Q8NEP3 725 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OR6K3Q8NGY3 331 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 FCAMRQ8WWV6 532 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ASB12Q8WXK4 309 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NSMAFQ92636 917 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ARSGQ96EG1 525 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PELI1Q96FA3 418 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 AIF1LQ9BQI0 150 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 RNF208Q9H0X6 261 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF768Q9H5H4 540 aaKnown RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 FANCFQ9NPI8 374 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NRIP3Q9NQ35 241 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 TAS2R10Q9NYW0 307 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SLC25A13Q9UJS0 675 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PLCL2Q9UPR0 1127 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ERVK-19Q9WJR5 959 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SPTBP11277 2137 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 F5H5P2 479 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 F8W036 122 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 LCMT2O60294 686 aaKnown RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 CDC123O75794 336 aaPredicted RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ABLIM3O94929 683 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ACHEP22303 614 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MC3RP41968 323 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SSR2P43308 183 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OVCH1Q7RTY7 1134 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SLC36A1Q7Z2H8 476 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OR13C2Q8NGS9 318 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OR8K3Q8NH51 312 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 FKRPQ9H9S5 495 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NOX4Q9NPH5 578 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF223Q9UK11 482 aaPredicted RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 FOXJ3Q9UPW0 622 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MOKQ9UQ07 419 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OR6C74A6NCV1 312 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 ACOD1A6NK06 481 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 GPR31O00270 319 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 CST5P28325 142 aaPredicted RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PRKAR1BP31321 381 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 FNTBP49356 437 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 REEP5Q00765 189 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SORDQ00796 357 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 CBFBQ13951 182 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PRAMEF8Q5VWM4 474 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 PRAMEF7Q5VXH5 474 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 LRRN1Q6UXK5 716 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 OR2AK2Q8NG84 335 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 SFXN5Q8TD22 340 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NARS2Q96I59 477 aaKnown RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 LRIG1Q96JA1 1093 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 HS6ST2Q96MM7 605 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MACROD1Q9BQ69 325 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MFFQ9GZY8 342 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 WDR13Q9H1Z4 485 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 WSB2Q9NYS7 404 aaPredicted RBP10.04□□□□□ -0.8
ZNF558-201ENST00000301475 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 IRAK3Q9Y616 596 aa10.04□□□□□ -0.8
ZNF558-201ENST00000301475 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 IFITM5A6NNB3 132 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 NEDD8-MDP1E9PL57 170 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 H7C2Y5 167 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 OGG1O15527 345 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 OR1F1O43749 312 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF254O75437 659 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 SNAPC5O75971 98 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 SERPINA3P01011 423 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 CLTBP09497 229 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ELFN1P0C7U0 828 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 CDK2P24941 298 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 RECQLP46063 649 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF136P52737 540 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 LGALS3BPQ08380 585 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 OR4C11Q6IEV9 310 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 HTR3DQ70Z44 454 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 MUC20Q8N307 709 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 SYNPRQ8TBG9 265 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 CD180Q99467 661 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 KLHL28Q9NXS3 571 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 RASL12Q9NYN1 266 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 TAS2R3Q9NYW6 316 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 MLXQ9UH92 298 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 OR2W5A6NFC9 320 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 WASH3PC4AMC7 463 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 TMIGD3P0DMS9 266 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 RPA2P15927 270 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 BMP7P18075 431 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 LTB4RQ15722 352 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 TPGS2Q68CL5 300 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms