RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GPALPP1Q8IXQ4 340 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 CLIP4Q8N3C7 705 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 OR2M7Q8NG81 312 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 MAGEE2Q8TD90 523 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-201ENST00000298966 EFHD2Q96C19 240 aaPredicted RBP19.03■□□□□ 0.64
SMCO4-201ENST00000298966 TMCO6Q96DC7 493 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 C18orf12Q96KH6 178 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 FNDC11Q9BVV2 318 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 ACER3Q9NUN7 267 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 HPF1Q9NWY4 346 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 CRIM1Q9NZV1 1036 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 YARS2Q9Y2Z4 477 aaKnown RBP19.03■□□□□ 0.64
SMCO4-201ENST00000298966 TESMINQ9Y4I5 508 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 FAM215AQ9Y5M1 114 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 ORC6Q9Y5N6 252 aa19.03■□□□□ 0.64
SMCO4-201ENST00000298966 PINLYPA6NC86 204 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 FAM47E-STBD1D6RA91 191 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 CYP4B1P13584 511 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 ANXA8P13928 327 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 CDH2P19022 906 aaPredicted RBP19.02■□□□□ 0.64
SMCO4-201ENST00000298966 LIMS1P48059 325 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 CDH12P55289 794 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 PAMR1Q6UXH9 720 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 ZNF614Q8N883 585 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 OR4D11Q8NGI4 311 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 OR4C15Q8NGM1 316 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 NR1H4Q96RI1 486 aaPredicted RBP19.02■□□□□ 0.64
SMCO4-201ENST00000298966 ADOQ96SZ5 270 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 SMR3AQ99954 134 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 NMNAT1Q9HAN9 279 aaPredicted RBP19.02■□□□□ 0.64
SMCO4-201ENST00000298966 B4GALT7Q9UBV7 327 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 ENOPH1Q9UHY7 261 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 A4GNTQ9UNA3 340 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 U3KQV3 271 aa19.02■□□□□ 0.64
SMCO4-201ENST00000298966 MPDZO75970 2070 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 NPIPA5A0A0B4J1W7 369 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 A6NNC1 897 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 ALG1L2C9J202 215 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 NPIPA7E9PJI5 369 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 FAAHO00519 579 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 WDR1O75083 606 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 CSTAP01040 98 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 IGHG3P01860 377 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 RAF1P04049 648 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 NPIPA8P0DM63 369 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 UQCRC1P31930 480 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 RAD23AP54725 363 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 TAS2R41P59536 307 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 RPP38P78345 283 aaKnown RBP19.01■□□□□ 0.63
SMCO4-201ENST00000298966 MICAQ29983 383 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 C6orf52Q5T4I8 152 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 C1orf185Q5T7R7 199 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 RTL6Q6ICC9 239 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 ZNF613Q6PF04 617 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 COMTD1Q86VU5 262 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 LACC1Q8IV20 430 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 FAM71CQ8NEG0 241 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 WFDC11Q8NEX6 87 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 OR4C3Q8NH37 302 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 GIPC3Q8TF64 312 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 ASB15Q8WXK1 588 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 TFAP2CQ92754 450 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 MCHR1Q99705 422 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 ADI1Q9BV57 179 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 TTTY12Q9BZ98 90 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 TRIM2Q9C040 744 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 MAGED1Q9Y5V3 778 aaPredicted RBP19.01■□□□□ 0.63
SMCO4-201ENST00000298966 LIPGQ9Y5X9 500 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 ARHGAP21Q5T5U3 1957 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 EML6Q6ZMW3 1958 aa19.01■□□□□ 0.63
SMCO4-201ENST00000298966 FN1P02751 2386 aaKnown RBP19■□□□□ 0.63
SMCO4-201ENST00000298966 CENPVL1A0A0U1RR11 272 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 H0YAE9 185 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 PRKNO60260 465 aaPredicted RBP19■□□□□ 0.63
SMCO4-201ENST00000298966 INHBBP09529 407 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 SLC6A8P48029 635 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 ZNF136P52737 540 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 MERTKQ12866 999 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 TRAM2Q15035 370 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 NPTX1Q15818 432 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 DEFB113Q30KQ7 82 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 DCST1Q5T197 706 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 FNDC7Q5VTL7 733 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 FAHD1Q6P587 224 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 OPN5Q6U736 354 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 CLEC9AQ6UXN8 241 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 PLEKHM3Q6ZWE6 761 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 TRILQ7L0X0 811 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 HS3ST5Q8IZT8 346 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 FAM109AQ8N4B1 249 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 FAM222BQ8WU58 562 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 LRRC46Q96FV0 321 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 ANKRD60Q9BZ19 345 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 SMURF2Q9HAU4 748 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 TMEM27Q9HBJ8 222 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 PDP1Q9P0J1 537 aaPredicted RBP19■□□□□ 0.63
SMCO4-201ENST00000298966 CSPG4Q6UVK1 2322 aa19■□□□□ 0.63
SMCO4-201ENST00000298966 A0A1B0GVC2 190 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 TRAPPC13A5PLN9 417 aa18.99■□□□□ 0.63
SMCO4-201ENST00000298966 J3KTA2 159 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms