RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 IL10RAQ13651 578 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM163Q8TC26 289 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 CCDC74BQ96LY2 380 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF587Q96SQ5 575 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 QRSL1Q9H0R6 528 aaKnown RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF696Q9H7X3 374 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF223Q9UK11 482 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 PRELID1Q9Y255 219 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 KLF13Q9Y2Y9 288 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 SNX11Q9Y5W9 270 aa16.43■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM269A0A1B0GVZ9 245 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 TCRBV3S1A0A5B6 114 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 RFPL3O75679 317 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 LPLP06858 475 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 T-ENOLP0DO92 83 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 IFNGR1P15260 489 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 TEAD1P28347 426 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CXCR4P61073 352 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SELPLGQ14242 412 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 MKXQ8IYA7 352 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 MICU1Q9BPX6 476 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 MRI1Q9BV20 369 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 C5orf67F2Z3F1 127 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SMAD9O15198 467 aaKnown RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CRTAPO75718 401 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 BPNT1O95861 308 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC6A12P48065 614 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 PSMA6P60900 246 aaKnown RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC36A2Q495M3 483 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SIRT6Q8N6T7 355 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CALHM2Q9HA72 323 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 A0A1B0GWA3 101 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 A8MVM7 634 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC33A1O00400 549 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 GLSO94925 669 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 MPIG6BO95866 241 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 IL9P15248 144 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CHMP24386 653 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 HTR5AP47898 357 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CD83Q01151 205 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 SLC16A11Q8NCK7 471 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR51T1Q8NGJ9 327 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 LMF1Q96S06 567 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 C20orf27Q9GZN8 174 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF350Q9GZX5 532 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 M0R036 132 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 UBFD1O14562 309 aaKnown RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 PIAS2O75928 621 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 NME1P15531 152 aaKnown RBP16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM205Q6UW68 189 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 KCTD20Q7Z5Y7 419 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR13C2Q8NGS9 318 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CREB3L1Q96BA8 519 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 KATNB1Q9BVA0 655 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 NRSN2Q9GZP1 204 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 INMT-MINDY4F8WBC2 141 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAB12Q6IQ22 244 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 Q7L0L9 218 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 Q8N402 240 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 ANKRD60Q9BZ19 345 aa16.42■□□□□ 0.22
CDC42EP3-201ENST00000295324 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 GYPBP06028 91 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 MTHFD2P13995 350 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 AGAP7PQ5VUJ5 663 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 AGAP4Q96P64 663 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 C19orf53Q9UNZ5 99 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 UBE2J1Q9Y385 318 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 PRRG2O14669 202 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAD1O60671 282 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 EIF3IQ13347 325 aaKnown RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 GNMTQ14749 295 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 LIMS2Q7Z4I7 341 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 RAB39BQ96DA2 213 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 SYT3Q9BQG1 590 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 LRRC61Q9BV99 259 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF700Q9H0M5 742 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 FAM230AA0A1W2PPH8 454 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 I3L521 148 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 ATP1B3P54709 279 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 MAB21L1Q13394 359 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 FAM53BQ14153 422 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 MARCH3Q86UD3 253 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 RETREG3Q86VR2 466 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 MORN4Q8NDC4 146 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 ZNF471Q9BX82 626 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 SPEM2Q0P670 501 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 SNTB2Q13425 540 aaKnown RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 VWA2Q5GFL6 755 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 CPEB2Q7Z5Q1 589 aaKnown RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 USB1Q9BQ65 265 aaKnown RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 TMEM38AQ9H6F2 299 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 B3GNT3Q9Y2A9 372 aa16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 MARF1Q9Y4F3 1742 aaKnown RBP16.41■□□□□ 0.22
CDC42EP3-201ENST00000295324 OR6C76A6NM76 312 aa16.4■□□□□ 0.22
CDC42EP3-201ENST00000295324 SERPINA5P05154 406 aa16.4■□□□□ 0.22
CDC42EP3-201ENST00000295324 CD22P20273 847 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms