RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HYAL4Q2M3T9 481 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ULK3Q6PHR2 472 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 HS3ST5Q8IZT8 346 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 PIK3C3Q8NEB9 887 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 CYGBQ8WWM9 190 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ST8SIA1Q92185 356 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 HHATLQ9HCP6 504 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TNFRSF10DQ9UBN6 386 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TMED7Q9Y3B3 224 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 MAGED1Q9Y5V3 778 aaPredicted RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM72A0PK05 275 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TRIM64CA6NLI5 447 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 NPIPA5E9PKD4 350 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ACOT7O00154 380 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TNFRSF11BO00300 401 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 HPNP05981 417 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 THRBP10828 461 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 STARP49675 285 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 POLR2HP52434 150 aaKnown RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ARHGDIAP52565 204 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SEC23BQ15437 767 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 EXOC3L2Q2M3D2 409 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 TMEM44Q2T9K0 475 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 CNPY1Q3B7I2 92 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 PRR30Q53SZ7 412 aaPredicted RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 STK32CQ86UX6 486 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 OFCC1Q8IZS5 231 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 FAM109AQ8N4B1 249 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 DNAJA4Q8WW22 397 aaPredicted RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SLC38A4Q969I6 547 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 OR2B2Q9GZK3 357 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 OR11A1Q9GZK7 315 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 VCX3AQ9NNX9 186 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SELENONQ9NZV5 590 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 NPIPA1Q9UND3 350 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF337Q9Y3M9 751 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
CCDC140-201ENST00000295226 PCDHGB5Q9Y5G0 923 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
CCDC140-201ENST00000295226 SPTA1P02549 2419 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 A0A087WZY1 265 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ZC3H12DA2A288 527 aaKnown RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ELOA3DA6NLF2 546 aaPredicted RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 KPNA4O00629 521 aaPredicted RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 CHP2O43745 196 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 PIP5K1CO60331 668 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 CXCR1P25024 350 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SHC1P29353 583 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ALDH6A1Q02252 535 aaKnown RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 TRAM2Q15035 370 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ELOA3BQ3SY89 546 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SLC25A53Q5H9E4 307 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 C1QL3Q5VWW1 255 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ANKRD34AQ69YU3 496 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 RPUSD3Q6P087 351 aaKnown RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SATL1Q86VE3 508 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 GTPBP8Q8N3Z3 284 aaPredicted RBP13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ELOA3Q8NG57 546 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SLC7A13Q8TCU3 470 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SMPDL3BQ92485 455 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ZBTB8AQ96BR9 441 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 NRBF2Q96F24 287 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 MRGPRX4Q96LA9 322 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 SFXN2Q96NB2 322 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ZDHHC11Q9H8X9 412 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 REEP1Q9H902 201 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 ORC6Q9Y5N6 252 aa13.68□□□□□ -0.22
CCDC140-201ENST00000295226 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 A0A087WUJ7 227 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 A0A087WUU8 490 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 H3BML4 177 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ETV2O00321 342 aaPredicted RBP13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 SUSD5O60279 629 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ATP6V1B1P15313 513 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 PRKACGP22612 351 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 IFNA8P32881 189 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 RAD23AP54725 363 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 UGT2B15P54855 530 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ESRRGP62508 458 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 PPP2R2BQ00005 443 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 HSF1Q00613 529 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 OTUD3Q5T2D3 398 aaPredicted RBP13.67□□□□□ -0.22
CCDC140-201ENST00000295226 LINC00114Q6XXX2 140 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 SIAH3Q8IW03 269 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF786Q8N393 782 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ZNF555Q8NEP9 628 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 OR4C15Q8NGM1 316 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 PFN4Q8NHR9 129 aa13.67□□□□□ -0.22
CCDC140-201ENST00000295226 ALPK1Q96QP1 1244 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms