RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CHRNA9Q9UGM1 479 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 MUTYHQ9UIF7 546 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 GSTK1Q9Y2Q3 226 aa17.65■□□□□ 0.42
BRAF-201ENST00000288602 IGKV1D-42A0A075B6H8 117 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 IGHV3-20A0A0C4DH32 117 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 A0A1W2PQL4 384 aaPredicted RBP17.64■□□□□ 0.42
BRAF-201ENST00000288602 C4orf47A7E2U8 309 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 CASKO14936 926 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 DYRK3O43781 588 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 NDUFB2O95178 105 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 SBK2P0C263 348 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 MST1P26927 711 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 GPLD1P80108 840 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 SKP2Q13309 424 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 RPTNQ6XPR3 784 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 TMPRSS11AQ6ZMR5 421 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 ZNF574Q6ZN55 896 aaPredicted RBP17.64■□□□□ 0.42
BRAF-201ENST00000288602 SSX6Q7RTT6 188 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 CADM3Q8N126 398 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 ZPLD1Q8TCW7 415 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 DNAJA4Q8WW22 397 aaPredicted RBP17.64■□□□□ 0.42
BRAF-201ENST00000288602 SMPDL3BQ92485 455 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 MVB12AQ96EY5 273 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 VN1R1Q9GZP7 353 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 PAIP2BQ9ULR5 123 aaKnown RBP17.64■□□□□ 0.42
BRAF-201ENST00000288602 V9GYH0 126 aa17.64■□□□□ 0.42
BRAF-201ENST00000288602 MN1Q10571 1320 aaPredicted RBP17.64■□□□□ 0.41
BRAF-201ENST00000288602 TCRBV16S1A1N1A0A5B0 115 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 SNX4O95219 450 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 OR8H2Q8N162 312 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 RELTQ969Z4 430 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 TP53INP1Q96A56 240 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 BABAM2Q9NXR7 383 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 CMAHPQ9Y471 501 aa17.64■□□□□ 0.41
BRAF-201ENST00000288602 TRDV1A0A1B0GX56 115 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 A0A1B0GX78 115 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ELOA3DA6NLF2 546 aaPredicted RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 BLOC1S5-TXNDC5H3BN57 136 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 J3QLW9 94 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 DLGAP3O95886 979 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZNF19P17023 458 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ARRB1P49407 418 aaPredicted RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 OR12D2P58182 307 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 GALEQ14376 348 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ELAVL1Q15717 326 aaKnown RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 ELOA3BQ3SY89 546 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ARHGAP11AQ6P4F7 1023 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 POMZP3Q6PJE2 187 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 TMEM91Q6ZNR0 172 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 C10orf53Q8N6V4 93 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZNF527Q8NB42 609 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ELOA3Q8NG57 546 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 SLC35B4Q969S0 331 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 NMNAT3Q96T66 252 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 JAM3Q9BX67 310 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 MIXL1Q9H2W2 232 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 CCDC86Q9H6F5 360 aaKnown RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 ICAM5Q9UMF0 924 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 IQCMA0A1B0GVH7 501 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 TMEM221A6NGB7 291 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZNF264O43296 627 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 SSX4O60224 188 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 PDGFBP01127 241 aaPredicted RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 FGF9P31371 208 aaPredicted RBP17.63■□□□□ 0.41
BRAF-201ENST00000288602 ERVK-25P63136 954 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZNF85Q03923 595 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ACSM1Q08AH1 577 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZNF79Q15937 498 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 CARTPTQ16568 116 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 GUSBP11Q6P575 273 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 FAM71CQ8NEG0 241 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 MOSPD2Q8NHP6 518 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 NEIL3Q8TAT5 605 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 RASD2Q96D21 266 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 C4orf36Q96KX1 117 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 MOGAT1Q96PD6 335 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 ZMIZ1Q9ULJ6 1067 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 PCNX3Q9H6A9 2034 aa17.63■□□□□ 0.41
BRAF-201ENST00000288602 FRG2CA6NGY1 282 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 KHNYNO15037 678 aaKnown RBP17.62■□□□□ 0.41
BRAF-201ENST00000288602 RNF13O43567 381 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 WISP1O95388 367 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 HLA-DPB1P04440 258 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 NAA10P41227 235 aaPredicted RBP17.62■□□□□ 0.41
BRAF-201ENST00000288602 E2F1Q01094 437 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 BIKQ13323 160 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 EBPQ15125 230 aaKnown RBP17.62■□□□□ 0.41
BRAF-201ENST00000288602 ZSWIM7Q19AV6 140 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 WBP2NLQ6ICG8 309 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 MARCH3Q86UD3 253 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 SLC38A9Q8NBW4 561 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 SYNDIG1Q9H7V2 258 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 INIPQ9NRY2 104 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 UGT2A1Q9Y4X1 527 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 ISPDA4D126 451 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 TTC36A6NLP5 189 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 IFNGP01579 166 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
BRAF-201ENST00000288602 ARL9Q6T311 187 aa17.62■□□□□ 0.41
BRAF-201ENST00000288602 LYPD4Q6UWN0 246 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms