RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 IL10RAQ13651 578 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 ZNF658BQ4V348 819 aaPredicted RBP12.14□□□□□ -0.47
NUP54-201ENST00000264883 ACSM3Q53FZ2 586 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 OR5D16Q8NGK9 328 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 WNT2BQ93097 391 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 TIMP4Q99727 224 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 IL21Q9HBE4 155 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 BCL2L10Q9HD36 194 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 MED17Q9NVC6 651 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 INSL6Q9Y581 213 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 INSL5Q9Y5Q6 135 aa12.14□□□□□ -0.47
NUP54-201ENST00000264883 NDUFB6O95139 128 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PRF1P14222 555 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 XPAP23025 273 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 MAT2AP31153 395 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 PCBP4P57723 403 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 BLOC1S1P78537 153 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PRR5P85299 388 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 TSPAN31Q12999 210 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 TRAM2Q15035 370 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 IER5LQ5T953 404 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 SLC6A19Q695T7 634 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 TMEM220Q6QAJ8 160 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 DPPA4Q7L190 304 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 FAM122BQ7Z309 247 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 SYT9Q86SS6 491 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 OR2AK2Q8NG84 335 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 BRIX1Q8TDN6 353 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 FCAMRQ8WWV6 532 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PRMT8Q9NR22 394 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 A0A087WUU8 490 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 DAPL1A0PJW8 107 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 FMO6PO60774 539 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 SLC2A10O95528 541 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 UCHL1P09936 223 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 AHRP35869 848 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 ACVR1BP36896 505 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 HSD17B2P37059 387 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PSMD4P55036 377 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PRAMEF8Q5VWM4 474 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PRAMEF7Q5VXH5 474 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 PSRC1Q6PGN9 363 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 TMEM99Q8N816 258 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 OR6T1Q8NGN1 323 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 FAM46AQ96IP4 442 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 TCEAL7Q9BRU2 100 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 RHBGQ9H310 441 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
NUP54-201ENST00000264883 MKL2Q9ULH7 1088 aa12.13□□□□□ -0.47
NUP54-201ENST00000264883 A0A1W2PPK0 400 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 PYCARD-AS1I3L0S3 204 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 UBE2CO00762 179 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 FLRT2O43155 660 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 MT-ND5P03915 603 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 CKMP06732 381 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 FBP1P09467 338 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 FPR3P25089 353 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 KHKP50053 298 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 CAPZA1P52907 286 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 UBE2MP61081 183 aaKnown RBP12.12□□□□□ -0.47
NUP54-201ENST00000264883 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
NUP54-201ENST00000264883 ZNF805Q5CZA5 627 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 PRAMEF14Q5SWL7 426 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
NUP54-201ENST00000264883 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 C11orf88Q6PI97 169 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 CPOQ8IVL8 374 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 EID2Q8N6I1 236 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 DNAAF1Q8NEP3 725 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 OSTF1Q92882 214 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 TM4SF18Q96CE8 201 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 SLC35G5Q96KT7 338 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 PELI2Q9HAT8 420 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 HINT3Q9NQE9 182 aaKnown RBP12.12□□□□□ -0.47
NUP54-201ENST00000264883 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
NUP54-201ENST00000264883 ADAM29Q9UKF5 820 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 SH2B3Q9UQQ2 575 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 A0A0D9SG52 128 aa12.12□□□□□ -0.47
NUP54-201ENST00000264883 FAM183AA6NL82 134 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms