RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TNFRSF10DQ9UBN6 386 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 PLEKHB1Q9UF11 243 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 ALG5Q9Y673 324 aa13.47□□□□□ -0.25
TRAFD1-201ENST00000257604 A0A1W2PR77 199 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 FAM25AB3EWG3 89 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 FAM25CB3EWG5 89 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 FAM25GB3EWG6 89 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 PRODHO43272 600 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 CTNSO60931 367 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 PIAS2O75928 621 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 NR0B1P51843 470 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 FAPQ12884 760 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 WDR45BQ5MNZ6 344 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 KIRREL2Q6UWL6 708 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 LANCL3Q6ZV70 420 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 OR4C6Q8NH72 309 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SPRYD4Q8WW59 207 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 PRSS27Q9BQR3 290 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 NDC1Q9BTX1 674 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 NXF5Q9H1B4 397 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SLA2Q9H6Q3 261 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 ACOXLQ9NUZ1 547 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 LMO7DNF2Z398 122 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SRPX2O60687 465 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 OR5F1O95221 314 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 ZGLP1P0C6A0 271 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 ACVR1BP36896 505 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 CENPAP49450 140 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 CTBP2P56545 445 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 CRMP1Q14194 572 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 PRPF38BQ5VTL8 546 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 ARL9Q6T311 187 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 RASSF6Q6ZTQ3 369 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SIRT6Q8N6T7 355 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC25A46Q96AG3 418 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 HS6ST2Q96MM7 605 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 CBLCQ9ULV8 474 aa13.46□□□□□ -0.25
TRAFD1-201ENST00000257604 FAM240BA0A1B0GVZ2 78 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 J3QLW9 94 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 CASKO14936 926 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF749O43361 778 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF780AO75290 641 aaPredicted RBP13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 NGFRP08138 427 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF19P17023 458 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 SKP1P63208 163 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 DECR1Q16698 335 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 FAM26EQ8N5C1 309 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 C19orf18Q8NEA5 215 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 OR8H1Q8NGG4 311 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 OR1L3Q8NH93 324 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 SMOC1Q9H4F8 434 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 CTSFQ9UBX1 484 aa13.46□□□□□ -0.26
TRAFD1-201ENST00000257604 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 ARRDC5A6NEK1 342 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 H7C1C5 153 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC2A2P11168 524 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 POU3F3P20264 500 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 EVI2BP34910 448 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 LCN6P62502 163 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 RHAGQ02094 409 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 GRM7Q14831 915 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 HLA-DQA1Q5Y7H0 255 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 TRIQKQ629K1 86 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 Q8N402 240 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 NANOGP1Q8N7R0 232 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 BCORP1Q8N888 145 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 ELF4Q99607 663 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 KRCC1Q9NPI7 259 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 FGF21Q9NSA1 209 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 TLCD2A6NGC4 264 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 SURF4O15260 269 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 OIP5O43482 229 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 CDC40O60508 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 OPN1LWP04000 364 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 F13BP05160 661 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 CT45A8P0DMV1 189 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 CT45A9P0DMV2 189 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 PLAURQ03405 335 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 ASAH1Q13510 395 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 PRTGQ2VWP7 1150 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 KLHL22Q53GT1 634 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 CT45A2Q5DJT8 189 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 DDI2Q5TDH0 399 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 TMEM99Q8N816 258 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 NDUFB11Q9NX14 153 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 CDH10Q9Y6N8 788 aa13.45□□□□□ -0.26
TRAFD1-201ENST00000257604 DAPL1A0PJW8 107 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 FAM221BA6H8Z2 402 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 HCRTR2O43614 444 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 FPR3P25089 353 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms