RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CAMK2AQ9UQM7 478 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 GLI3P10071 1580 aa17.64■□□□□ 0.41
PTPRE-201ENST00000254667 WDPCPO95876 746 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 DRD5P21918 477 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 ILKQ13418 452 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 DUSP19Q8WTR2 217 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 FAIMQ9NVQ4 179 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 KCND3Q9UK17 655 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 HEMK1Q9Y5R4 338 aaPredicted RBP17.63■□□□□ 0.41
PTPRE-201ENST00000254667 GPX2P18283 190 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 C3orf38Q5JPI3 329 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF695Q8IW36 515 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 EGLN3Q9H6Z9 239 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 MAN2C1Q9NTJ4 1040 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 OLAHQ9NV23 265 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 CR2P20023 1033 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 ITPKCQ96DU7 683 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 OR2T7P0C7T2 308 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 GPR176Q14439 515 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 NKPD1Q17RQ9 610 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 MFSD12Q6NUT3 480 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 CFAP77Q6ZQR2 320 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 OR2T27Q8NH04 317 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 TOMM40LQ969M1 308 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 STACQ99469 402 aa17.63■□□□□ 0.41
PTPRE-201ENST00000254667 A0A1B0GX78 115 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 YY2O15391 372 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 TRHRP34981 398 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 MED25Q71SY5 747 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 CNEP1R1Q8N9A8 125 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 OR1E3Q8WZA6 343 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 KATNB1Q9BVA0 655 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 A6NHS1 94 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 HMX3A6NHT5 357 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 KDM4EB2RXH2 506 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 GOSR2O14653 212 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 NUDT21O43809 227 aaKnown RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 EIF1BO60739 113 aaKnown RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 SLC22A5O76082 557 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 F13BP05160 661 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PLCXD3Q63HM9 321 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 OR4F15Q8NGB8 312 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 CPT1CQ8TCG5 803 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 ASB12Q8WXK4 309 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 ELP4Q96EB1 424 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PDXPQ96GD0 296 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 C19orf43Q9BQ61 176 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 B4DXG7 233 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 B8ZZF3 427 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 SERPINE2P07093 398 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 EFNA3P52797 238 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF169Q14929 603 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PYCR3Q53H96 274 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 SLC16A14Q7RTX9 510 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 NLRP8Q86W28 1048 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 SIMC1Q8NDZ2 872 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 KCTD12Q96CX2 325 aaKnown RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 RAB39BQ96DA2 213 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 C1orf198Q9H425 327 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PADI1Q9ULC6 663 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 RHBDD3Q9Y3P4 386 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 N4BP2Q86UW6 1770 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 B4GAT1O43505 415 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 KNG1P01042 644 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 S100PP25815 95 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 ARNTP27540 789 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 C21orf33P30042 268 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 P2RY14Q15391 338 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 OR7E24Q6IFN5 339 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 FAM198BQ6UWH4 519 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PHC2Q8IXK0 858 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 RGCCQ9H4X1 137 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 FGF22Q9HCT0 170 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 RASD1Q9Y272 281 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 CHRM4P08173 479 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 FXYD4P59646 89 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 MPEG1Q2M385 716 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 XKR7Q5GH72 579 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 GRAMD2AQ8IUY3 354 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 PDZD9Q8IXQ8 264 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 SENP5Q96HI0 755 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-201ENST00000254667 HINT2Q9BX68 163 aa17.62■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM212A6NML5 194 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 DAPP51397 102 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 EXT1Q16394 746 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 NXNL2Q5VZ03 156 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM64Q6YI46 380 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 MICU1Q9BPX6 476 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 ST6GALNAC5Q9BVH7 336 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 UNKLQ9H9P5 680 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 MBNL1Q9NR56 388 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 VSX1Q9NZR4 365 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 DHCR7Q9UBM7 475 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 TMED7-TICAM2A0A0A6YYA0 188 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 GFYI3L273 518 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 CCR5P51681 352 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 ARF1P84077 181 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 HAGHLQ6PII5 290 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 AAED1Q7RTV5 226 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 C22orf15Q8WYQ4 148 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms