RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
LSM5-201ENST00000223084 DDIT4LQ96D03 193 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 LRRC46Q96FV0 321 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 GPATCH1Q9BRR8 931 aaKnown RBP11.31□□□□□ -0.6
LSM5-201ENST00000223084 C12orf49Q9H741 205 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 FAM53CQ9NYF3 392 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 PROCRQ9UNN8 238 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 HDGFL3Q9Y3E1 203 aa11.31□□□□□ -0.6
LSM5-201ENST00000223084 ANKHD1Q8IWZ3 2542 aaKnown RBP11.31□□□□□ -0.6
LSM5-201ENST00000223084 A0A1B0GWA3 101 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 ENO4A6NNW6 628 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 FAM220BPB1ANY3 271 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 ZNF814B7Z6K7 855 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 MSTNO14793 375 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 TPST2O60704 377 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 PRKD3O94806 890 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 PMS2P2O95744 297 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 CD247P20963 164 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 AGTR1P30556 359 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 NUDT2P50583 147 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 RGS8P57771 180 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 CSNK2A1P68400 391 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 RNPS1Q15287 305 aaKnown RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 EXOC3L2Q2M3D2 409 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 GTF2IRD2BQ6EKJ0 949 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 CCDC80Q76M96 950 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 NUFIP2Q7Z417 695 aaKnown RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 PATL1Q86TB9 770 aaKnown RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 ATG4DQ86TL0 474 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 SLC15A3Q8IY34 581 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 OR52E4Q8NGH9 312 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 OR6K3Q8NGY3 331 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 SLC26A7Q8TE54 656 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 SLC35B4Q969S0 331 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 ZNF300Q96RE9 604 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 CCT8L2Q96SF2 557 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 EFCAB1Q9HAE3 211 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 GLRX2Q9NS18 164 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 TMEM181Q9P2C4 612 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 RPS6KB2Q9UBS0 482 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
LSM5-201ENST00000223084 SLC13A4Q9UKG4 626 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
LSM5-201ENST00000223084 CYTIPO60759 359 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 RAMP1O60894 148 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 LGI1O95970 557 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 CD8BP10966 210 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 FPR1P21462 350 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 FKBP2P26885 142 aaKnown RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 PRDX6P30041 224 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 KCNJ5P48544 419 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 CLK1P49759 484 aaKnown RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 SLC7A2P52569 658 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 CEACAM7Q14002 265 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 NPTX1Q15818 432 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 TMEM201Q5SNT2 666 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 ERICH5Q6P6B1 374 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 RBM45Q8IUH3 476 aaKnown RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 CCDC103Q8IW40 242 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 SLC43A2Q8N370 569 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 BHLHE22Q8NFJ8 381 aaPredicted RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 VANGL1Q8TAA9 524 aaPredicted RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 CMTM5Q96DZ9 223 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 ARHGDIGQ99819 225 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 POTEKPQ9BYX7 375 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 TRIM2Q9C040 744 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 PLSCR4Q9NRQ2 329 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 TESQ9UGI8 421 aaKnown RBP11.29□□□□□ -0.6
LSM5-201ENST00000223084 C2CD3Q4AC94 2353 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 DCHS2Q6V1P9 2916 aa11.29□□□□□ -0.6
LSM5-201ENST00000223084 ABCA4P78363 2273 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
LSM5-201ENST00000223084 A8MVM7 634 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 NME4O00746 187 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 YES1P07947 543 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 TNFRSF1BP20333 461 aa11.28□□□□□ -0.6
LSM5-201ENST00000223084 PTNP21246 168 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms