RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 ACSM3Q53FZ2 586 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 MARC1Q5VT66 337 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 UBE3DQ7Z6J8 389 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 PUSL1Q8N0Z8 303 aaKnown RBP4.02□□□□□ -1.77
SCN3A-209ENST00000639244 DMBX1Q8NFW5 382 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SLC2A12Q8TD20 617 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 FUBP1Q96AE4 644 aaKnown RBP4.02□□□□□ -1.77
SCN3A-209ENST00000639244 BTF3L4Q96K17 158 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 NPAS2Q99743 824 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 LACRTQ9GZZ8 138 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SSU72Q9NP77 194 aaKnown RBP4.02□□□□□ -1.77
SCN3A-209ENST00000639244 OR7C2O60412 319 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 PIAS1O75925 651 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 CD5P06127 495 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 C8AP07357 584 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 FGF2P09038 288 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 C1SP09871 688 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SMPD1P17405 629 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 HLA-GP17693 338 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 P2RY2P41231 377 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 TDGF1P3P51864 188 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SELENOTP62341 195 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SLC7A9P82251 487 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 UBE2SQ16763 222 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 PIGGQ5H8A4 983 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 FSTL4Q6MZW2 842 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SLC30A8Q8IWU4 369 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ZCCHC10Q8TBK6 192 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 C20orf24Q9BUV8 137 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 PRO1933Q9H354 126 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ARMCX1Q9P291 453 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 CRLS1Q9UJA2 301 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 INTS1Q8N201 2190 aaKnown RBP4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ARHGAP21Q5T5U3 1957 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 FDXRP22570 491 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 CDH12P55289 794 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 DNAJB13P59910 316 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 RBPJQ06330 500 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 DAG1Q14118 895 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ALKBH6Q3KRA9 238 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 SAMD4BQ5PRF9 694 aaKnown RBP4.02□□□□□ -1.77
SCN3A-209ENST00000639244 LIPMQ5VYY2 423 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 DNASE2BQ8WZ79 361 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 DTD2Q96FN9 168 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 G6PC3Q9BUM1 346 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 KATNB1Q9BVA0 655 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ALOXE3Q9BYJ1 711 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 KLK4Q9Y5K2 254 aa4.02□□□□□ -1.77
SCN3A-209ENST00000639244 ANXA2P2A6NMY6 339 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TCP10L2B9ZVM9 353 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SGK494L7N484 410 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PHOX2AO14813 284 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MYF5P13349 255 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CD72P21854 359 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TMEM33P57088 247 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 BOP1Q14137 746 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 XKR7Q5GH72 579 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SYT6Q5T7P8 510 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 UEVLDQ8IX04 471 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MMP21Q8N119 569 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PARP16Q8N5Y8 322 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CASTOR1Q8WTX7 329 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CELF6Q96J87 481 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SSBP4Q9BWG4 385 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 FAM49AQ9H0Q0 323 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ACSS3Q9H6R3 686 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 WBP1LQ9NX94 342 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RNF150Q9ULK6 438 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 FMN2Q9NZ56 1722 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MYOCOSA0A1B0GUC4 107 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ANKRD61A6NGH8 418 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF726A6NNF4 738 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 DUX1O43812 170 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 NRP2O60462 931 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 HOXC6P09630 235 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RAB7AP51149 207 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LAPTM4AQ15012 233 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SF3A2Q15428 464 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RBBP7Q16576 425 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 KCTD19Q17RG1 926 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLC36A2Q495M3 483 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 FAM182BQ5T319 152 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 IDNKQ5T6J7 187 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RHBDD2Q6NTF9 364 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 H3F3CQ6NXT2 135 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF585AQ6P3V2 769 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 WDR74Q6RFH5 385 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 COX15Q7KZN9 410 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LSRQ86X29 649 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 GPC2Q8N158 579 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 OR5M9Q8NGP3 310 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TCTN2Q96GX1 697 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 DUX5Q96PT3 197 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZSCAN10Q96SZ4 725 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CFHR5Q9BXR6 569 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MED20Q9H944 212 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms